Protein–RNA interactions for Protein: P11831

SRF, Serum response factor, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRFP11831 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
SRFP11831 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC17.24■□□□□ 0.35
SRFP11831 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SRFP11831 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC17.24■□□□□ 0.35
SRFP11831 PODN-203ENST00000395871 2744 ntTSL 5 BASIC17.24■□□□□ 0.35
SRFP11831 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC17.24■□□□□ 0.35
SRFP11831 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC17.24■□□□□ 0.35
SRFP11831 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
SRFP11831 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SRFP11831 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
SRFP11831 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
SRFP11831 ARSEP1-201ENST00000420443 635 ntBASIC17.24■□□□□ 0.35
SRFP11831 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
SRFP11831 HLA-V-204ENST00000476601 1289 ntBASIC17.24■□□□□ 0.35
SRFP11831 REEP4-207ENST00000523293 913 ntTSL 3 BASIC17.24■□□□□ 0.35
SRFP11831 AC105233.2-201ENST00000523697 349 ntBASIC17.24■□□□□ 0.35
SRFP11831 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC17.24■□□□□ 0.35
SRFP11831 AF228730.5-201ENST00000530288 346 ntBASIC17.24■□□□□ 0.35
SRFP11831 CHRNA5-203ENST00000559554 1051 ntTSL 3 BASIC17.24■□□□□ 0.35
SRFP11831 SSH2-210ENST00000582084 560 ntTSL 3 BASIC17.24■□□□□ 0.35
SRFP11831 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC17.24■□□□□ 0.35
SRFP11831 AC003101.2-201ENST00000612557 442 ntBASIC17.24■□□□□ 0.35
SRFP11831 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SRFP11831 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC17.24■□□□□ 0.35
SRFP11831 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SRFP11831 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
SRFP11831 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
SRFP11831 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC17.24■□□□□ 0.35
SRFP11831 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SRFP11831 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC17.24■□□□□ 0.35
SRFP11831 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SRFP11831 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
SRFP11831 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SRFP11831 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
SRFP11831 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC17.23■□□□□ 0.35
SRFP11831 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
SRFP11831 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SRFP11831 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
SRFP11831 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SRFP11831 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SRFP11831 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SRFP11831 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SRFP11831 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
SRFP11831 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SRFP11831 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
SRFP11831 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SRFP11831 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
SRFP11831 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC17.23■□□□□ 0.35
SRFP11831 AC142381.1-201ENST00000426099 345 ntBASIC17.23■□□□□ 0.35
SRFP11831 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SRFP11831 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC17.23■□□□□ 0.35
SRFP11831 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC17.23■□□□□ 0.35
SRFP11831 MPI-209ENST00000564003 1195 ntTSL 2 BASIC17.23■□□□□ 0.35
SRFP11831 AL138918.1-201ENST00000568306 659 ntBASIC17.23■□□□□ 0.35
SRFP11831 GPER1-207ENST00000619052 571 ntTSL 2 BASIC17.23■□□□□ 0.35
SRFP11831 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC17.23■□□□□ 0.35
SRFP11831 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SRFP11831 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SRFP11831 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SRFP11831 TOP3BP1-201ENST00000420768 1380 ntBASIC17.23■□□□□ 0.35
SRFP11831 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
SRFP11831 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
SRFP11831 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SRFP11831 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC17.23■□□□□ 0.35
SRFP11831 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
SRFP11831 LYSMD4-203ENST00000378904 2122 ntBASIC17.23■□□□□ 0.35
SRFP11831 HLA-DQB1-201ENST00000374943 1656 ntBASIC17.23■□□□□ 0.35
SRFP11831 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SRFP11831 NARF-206ENST00000457415 1668 ntTSL 5 BASIC17.23■□□□□ 0.35
SRFP11831 SLC22A20-204ENST00000530038 1673 ntBASIC17.23■□□□□ 0.35
SRFP11831 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SRFP11831 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC17.22■□□□□ 0.35
SRFP11831 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SRFP11831 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
SRFP11831 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SRFP11831 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SRFP11831 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
SRFP11831 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SRFP11831 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
SRFP11831 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
SRFP11831 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC17.22■□□□□ 0.35
SRFP11831 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC17.22■□□□□ 0.35
SRFP11831 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SRFP11831 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SRFP11831 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
SRFP11831 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SRFP11831 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
SRFP11831 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
SRFP11831 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC17.22■□□□□ 0.35
SRFP11831 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
SRFP11831 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SRFP11831 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SRFP11831 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC17.22■□□□□ 0.35
SRFP11831 CDK4-206ENST00000549606 558 ntTSL 2 BASIC17.22■□□□□ 0.35
SRFP11831 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC17.22■□□□□ 0.35
SRFP11831 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
SRFP11831 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC17.22■□□□□ 0.35
SRFP11831 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SRFP11831 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SRFP11831 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 68.2 ms