Protein–RNA interactions for Protein: P0C221

CCDC175, Coiled-coil domain-containing protein 175, humanhuman

Predictions only

Length 793 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC175P0C221 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC175P0C221 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC175P0C221 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC18.63■□□□□ 0.57
CCDC175P0C221 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC175P0C221 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC175P0C221 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
CCDC175P0C221 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC175P0C221 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC175P0C221 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC18.63■□□□□ 0.57
CCDC175P0C221 IGHV3-52-201ENST00000519770 353 ntBASIC18.63■□□□□ 0.57
CCDC175P0C221 GCSHP2-201ENST00000560971 527 ntBASIC18.63■□□□□ 0.57
CCDC175P0C221 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC18.63■□□□□ 0.57
CCDC175P0C221 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC175P0C221 ANKRD20A8P-203ENST00000641373 517 ntBASIC18.63■□□□□ 0.57
CCDC175P0C221 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC175P0C221 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC175P0C221 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC175P0C221 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC175P0C221 TBC1D3P5-201ENST00000579401 1545 ntBASIC18.63■□□□□ 0.57
CCDC175P0C221 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC175P0C221 AC010460.3-201ENST00000511359 1579 ntBASIC18.63■□□□□ 0.57
CCDC175P0C221 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC175P0C221 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC175P0C221 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC175P0C221 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
CCDC175P0C221 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CCDC175P0C221 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
CCDC175P0C221 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
CCDC175P0C221 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CCDC175P0C221 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC18.62■□□□□ 0.57
CCDC175P0C221 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CCDC175P0C221 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC18.62■□□□□ 0.57
CCDC175P0C221 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC18.62■□□□□ 0.57
CCDC175P0C221 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC18.62■□□□□ 0.57
CCDC175P0C221 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
CCDC175P0C221 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CCDC175P0C221 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CCDC175P0C221 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CCDC175P0C221 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
CCDC175P0C221 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CCDC175P0C221 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC18.62■□□□□ 0.57
CCDC175P0C221 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC18.62■□□□□ 0.57
CCDC175P0C221 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC18.62■□□□□ 0.57
CCDC175P0C221 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CCDC175P0C221 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC18.62■□□□□ 0.57
CCDC175P0C221 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
CCDC175P0C221 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
CCDC175P0C221 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC18.62■□□□□ 0.57
CCDC175P0C221 AC079602.3-201ENST00000623931 403 ntBASIC18.62■□□□□ 0.57
CCDC175P0C221 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC18.62■□□□□ 0.57
CCDC175P0C221 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CCDC175P0C221 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CCDC175P0C221 CYP2D8P-201ENST00000433633 1490 ntBASIC18.62■□□□□ 0.57
CCDC175P0C221 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC18.62■□□□□ 0.57
CCDC175P0C221 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CCDC175P0C221 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CCDC175P0C221 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC18.62■□□□□ 0.57
CCDC175P0C221 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC18.62■□□□□ 0.57
CCDC175P0C221 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CCDC175P0C221 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC18.62■□□□□ 0.57
CCDC175P0C221 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CCDC175P0C221 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CCDC175P0C221 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CCDC175P0C221 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CCDC175P0C221 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
CCDC175P0C221 AL596257.1-201ENST00000641463 2694 ntBASIC18.61■□□□□ 0.57
CCDC175P0C221 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC18.61■□□□□ 0.57
CCDC175P0C221 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC18.61■□□□□ 0.57
CCDC175P0C221 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC18.61■□□□□ 0.57
CCDC175P0C221 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
CCDC175P0C221 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CCDC175P0C221 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
CCDC175P0C221 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CCDC175P0C221 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC18.61■□□□□ 0.57
CCDC175P0C221 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
CCDC175P0C221 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
CCDC175P0C221 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
CCDC175P0C221 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CCDC175P0C221 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
CCDC175P0C221 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC18.61■□□□□ 0.57
CCDC175P0C221 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
CCDC175P0C221 AC097374.2-201ENST00000618617 1306 ntBASIC18.61■□□□□ 0.57
CCDC175P0C221 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
CCDC175P0C221 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CCDC175P0C221 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC18.61■□□□□ 0.57
CCDC175P0C221 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC18.61■□□□□ 0.57
CCDC175P0C221 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC18.61■□□□□ 0.57
CCDC175P0C221 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC18.61■□□□□ 0.57
CCDC175P0C221 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC18.61■□□□□ 0.57
CCDC175P0C221 AC010947.1-201ENST00000623454 693 ntBASIC18.61■□□□□ 0.57
CCDC175P0C221 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
CCDC175P0C221 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
CCDC175P0C221 AC132872.4-202ENST00000622924 2756 ntBASIC18.61■□□□□ 0.57
CCDC175P0C221 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC18.61■□□□□ 0.57
CCDC175P0C221 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CCDC175P0C221 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CCDC175P0C221 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
CCDC175P0C221 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
CCDC175P0C221 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CCDC175P0C221 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 74 ms