Protein–RNA interactions for Protein: P09493

TPM1, Tropomyosin alpha-1 chain, humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1P09493 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TPM1P09493 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
TPM1P09493 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC19.02■□□□□ 0.64
TPM1P09493 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
TPM1P09493 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC19.02■□□□□ 0.64
TPM1P09493 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
TPM1P09493 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
TPM1P09493 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC19.02■□□□□ 0.64
TPM1P09493 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC19.02■□□□□ 0.64
TPM1P09493 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
TPM1P09493 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
TPM1P09493 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
TPM1P09493 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
TPM1P09493 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
TPM1P09493 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
TPM1P09493 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
TPM1P09493 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
TPM1P09493 CNP-204ENST00000472031 1019 ntTSL 2 BASIC19.02■□□□□ 0.64
TPM1P09493 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
TPM1P09493 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
TPM1P09493 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
TPM1P09493 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC19.02■□□□□ 0.64
TPM1P09493 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
TPM1P09493 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
TPM1P09493 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
TPM1P09493 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC19.02■□□□□ 0.64
TPM1P09493 LINC01568-207ENST00000641790 1380 ntBASIC19.02■□□□□ 0.64
TPM1P09493 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
TPM1P09493 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
TPM1P09493 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
TPM1P09493 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC19.02■□□□□ 0.63
TPM1P09493 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC19.02■□□□□ 0.63
TPM1P09493 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC19.02■□□□□ 0.63
TPM1P09493 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.63
TPM1P09493 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC19.02■□□□□ 0.63
TPM1P09493 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
TPM1P09493 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.63
TPM1P09493 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC19.02■□□□□ 0.63
TPM1P09493 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TPM1P09493 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
TPM1P09493 KRT18P22-201ENST00000402024 1347 ntBASIC19.01■□□□□ 0.63
TPM1P09493 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TPM1P09493 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
TPM1P09493 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC19.01■□□□□ 0.63
TPM1P09493 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
TPM1P09493 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
TPM1P09493 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TPM1P09493 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
TPM1P09493 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
TPM1P09493 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC19.01■□□□□ 0.63
TPM1P09493 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC19.01■□□□□ 0.63
TPM1P09493 IGHV3-52-201ENST00000519770 353 ntBASIC19.01■□□□□ 0.63
TPM1P09493 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
TPM1P09493 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC19.01■□□□□ 0.63
TPM1P09493 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC19.01■□□□□ 0.63
TPM1P09493 AC079602.3-201ENST00000623931 403 ntBASIC19.01■□□□□ 0.63
TPM1P09493 AL031432.5-201ENST00000641059 760 ntBASIC19.01■□□□□ 0.63
TPM1P09493 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
TPM1P09493 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
TPM1P09493 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC19.01■□□□□ 0.63
TPM1P09493 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TPM1P09493 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
TPM1P09493 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
TPM1P09493 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC19.01■□□□□ 0.63
TPM1P09493 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TPM1P09493 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
TPM1P09493 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TPM1P09493 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC19■□□□□ 0.63
TPM1P09493 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC19■□□□□ 0.63
TPM1P09493 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
TPM1P09493 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC19■□□□□ 0.63
TPM1P09493 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TPM1P09493 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
TPM1P09493 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TPM1P09493 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
TPM1P09493 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC19■□□□□ 0.63
TPM1P09493 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC19■□□□□ 0.63
TPM1P09493 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC19■□□□□ 0.63
TPM1P09493 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TPM1P09493 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
TPM1P09493 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TPM1P09493 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC19■□□□□ 0.63
TPM1P09493 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC19■□□□□ 0.63
TPM1P09493 AP003733.1-201ENST00000491725 852 ntBASIC19■□□□□ 0.63
TPM1P09493 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC19■□□□□ 0.63
TPM1P09493 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
TPM1P09493 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC19■□□□□ 0.63
TPM1P09493 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC19■□□□□ 0.63
TPM1P09493 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC19■□□□□ 0.63
TPM1P09493 MIR4497-201ENST00000583208 89 ntBASIC19■□□□□ 0.63
TPM1P09493 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC19■□□□□ 0.63
TPM1P09493 LITAF-220ENST00000620789 692 ntTSL 5 BASIC19■□□□□ 0.63
TPM1P09493 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC19■□□□□ 0.63
TPM1P09493 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC19■□□□□ 0.63
TPM1P09493 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC19■□□□□ 0.63
TPM1P09493 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TPM1P09493 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC19■□□□□ 0.63
TPM1P09493 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC19■□□□□ 0.63
TPM1P09493 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TPM1P09493 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC19■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 46.4 ms