Protein–RNA interactions for Protein: P06727

APOA4, Apolipoprotein A-IV, humanhuman

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOA4P06727 METTL23-204ENST00000586752 904 ntTSL 2 BASIC17.29■□□□□ 0.36
APOA4P06727 AC138894.3-201ENST00000603787 634 ntBASIC17.29■□□□□ 0.36
APOA4P06727 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC17.29■□□□□ 0.36
APOA4P06727 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC17.29■□□□□ 0.36
APOA4P06727 CCNC-219ENST00000627680 896 ntTSL 5 BASIC17.29■□□□□ 0.36
APOA4P06727 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC17.29■□□□□ 0.36
APOA4P06727 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
APOA4P06727 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC17.29■□□□□ 0.36
APOA4P06727 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
APOA4P06727 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
APOA4P06727 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
APOA4P06727 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC17.29■□□□□ 0.36
APOA4P06727 AC093525.9-201ENST00000624961 1746 ntBASIC17.29■□□□□ 0.36
APOA4P06727 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC17.29■□□□□ 0.36
APOA4P06727 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
APOA4P06727 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC17.29■□□□□ 0.36
APOA4P06727 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
APOA4P06727 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
APOA4P06727 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
APOA4P06727 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC17.29■□□□□ 0.36
APOA4P06727 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
APOA4P06727 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC17.29■□□□□ 0.36
APOA4P06727 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
APOA4P06727 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC17.29■□□□□ 0.36
APOA4P06727 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
APOA4P06727 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC17.28■□□□□ 0.36
APOA4P06727 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
APOA4P06727 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
APOA4P06727 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC17.28■□□□□ 0.36
APOA4P06727 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
APOA4P06727 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC17.28■□□□□ 0.36
APOA4P06727 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
APOA4P06727 INTS4P1-201ENST00000438455 1935 ntBASIC17.28■□□□□ 0.36
APOA4P06727 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
APOA4P06727 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
APOA4P06727 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
APOA4P06727 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
APOA4P06727 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC17.28■□□□□ 0.36
APOA4P06727 RCN1P2-201ENST00000398357 915 ntBASIC17.28■□□□□ 0.36
APOA4P06727 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC17.28■□□□□ 0.36
APOA4P06727 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
APOA4P06727 NUS1P1-201ENST00000446295 882 ntBASIC17.28■□□□□ 0.36
APOA4P06727 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC17.28■□□□□ 0.36
APOA4P06727 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC17.28■□□□□ 0.36
APOA4P06727 AC109462.3-201ENST00000573934 613 ntBASIC17.28■□□□□ 0.36
APOA4P06727 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC17.28■□□□□ 0.36
APOA4P06727 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC17.28■□□□□ 0.36
APOA4P06727 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC17.28■□□□□ 0.36
APOA4P06727 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
APOA4P06727 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
APOA4P06727 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
APOA4P06727 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC17.28■□□□□ 0.36
APOA4P06727 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
APOA4P06727 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC17.28■□□□□ 0.36
APOA4P06727 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC17.28■□□□□ 0.36
APOA4P06727 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
APOA4P06727 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
APOA4P06727 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
APOA4P06727 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC17.28■□□□□ 0.36
APOA4P06727 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
APOA4P06727 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC17.27■□□□□ 0.36
APOA4P06727 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
APOA4P06727 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
APOA4P06727 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
APOA4P06727 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC17.27■□□□□ 0.36
APOA4P06727 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.36
APOA4P06727 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC17.27■□□□□ 0.36
APOA4P06727 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC17.27■□□□□ 0.36
APOA4P06727 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
APOA4P06727 AC105020.1-201ENST00000435356 2205 ntBASIC17.27■□□□□ 0.36
APOA4P06727 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
APOA4P06727 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
APOA4P06727 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC17.27■□□□□ 0.36
APOA4P06727 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
APOA4P06727 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.36
APOA4P06727 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
APOA4P06727 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
APOA4P06727 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC17.27■□□□□ 0.36
APOA4P06727 KRT16P4-201ENST00000453883 522 ntBASIC17.27■□□□□ 0.36
APOA4P06727 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC17.27■□□□□ 0.36
APOA4P06727 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC17.27■□□□□ 0.36
APOA4P06727 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC17.27■□□□□ 0.36
APOA4P06727 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC17.27■□□□□ 0.36
APOA4P06727 AC019129.2-201ENST00000609837 1235 ntBASIC17.27■□□□□ 0.36
APOA4P06727 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
APOA4P06727 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
APOA4P06727 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
APOA4P06727 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC17.27■□□□□ 0.35
APOA4P06727 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
APOA4P06727 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC17.27■□□□□ 0.35
APOA4P06727 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC17.27■□□□□ 0.35
APOA4P06727 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
APOA4P06727 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
APOA4P06727 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC17.27■□□□□ 0.35
APOA4P06727 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
APOA4P06727 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
APOA4P06727 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
APOA4P06727 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC17.27■□□□□ 0.35
APOA4P06727 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC17.27■□□□□ 0.35
APOA4P06727 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms