Protein–RNA interactions for Protein: P05423

POLR3D, DNA-directed RNA polymerase III subunit RPC4, humanhuman

Predicted RBP Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR3DP05423 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
POLR3DP05423 AC141586.5-201ENST00000624546 2050 ntBASIC20.58■□□□□ 0.88
POLR3DP05423 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
POLR3DP05423 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
POLR3DP05423 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
POLR3DP05423 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC20.58■□□□□ 0.88
POLR3DP05423 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
POLR3DP05423 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC20.58■□□□□ 0.88
POLR3DP05423 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC20.58■□□□□ 0.88
POLR3DP05423 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC20.58■□□□□ 0.88
POLR3DP05423 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC20.57■□□□□ 0.88
POLR3DP05423 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
POLR3DP05423 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC20.57■□□□□ 0.88
POLR3DP05423 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
POLR3DP05423 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC20.57■□□□□ 0.88
POLR3DP05423 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
POLR3DP05423 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
POLR3DP05423 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
POLR3DP05423 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
POLR3DP05423 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
POLR3DP05423 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
POLR3DP05423 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC20.57■□□□□ 0.88
POLR3DP05423 AP002414.1-201ENST00000391405 1147 ntBASIC20.57■□□□□ 0.88
POLR3DP05423 IMP4-203ENST00000409935 958 ntTSL 5 BASIC20.57■□□□□ 0.88
POLR3DP05423 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC20.57■□□□□ 0.88
POLR3DP05423 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC20.57■□□□□ 0.88
POLR3DP05423 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC20.57■□□□□ 0.88
POLR3DP05423 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC20.57■□□□□ 0.88
POLR3DP05423 AC040169.1-201ENST00000565382 521 ntBASIC20.57■□□□□ 0.88
POLR3DP05423 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC20.57■□□□□ 0.88
POLR3DP05423 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
POLR3DP05423 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC20.57■□□□□ 0.88
POLR3DP05423 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
POLR3DP05423 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC20.57■□□□□ 0.88
POLR3DP05423 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
POLR3DP05423 AL645608.8-201ENST00000606034 2086 ntBASIC20.57■□□□□ 0.88
POLR3DP05423 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC20.57■□□□□ 0.88
POLR3DP05423 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC20.57■□□□□ 0.88
POLR3DP05423 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
POLR3DP05423 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
POLR3DP05423 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
POLR3DP05423 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
POLR3DP05423 LYSMD4-203ENST00000378904 2122 ntBASIC20.56■□□□□ 0.88
POLR3DP05423 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC20.56■□□□□ 0.88
POLR3DP05423 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC20.56■□□□□ 0.88
POLR3DP05423 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
POLR3DP05423 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC20.56■□□□□ 0.88
POLR3DP05423 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
POLR3DP05423 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
POLR3DP05423 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC20.56■□□□□ 0.88
POLR3DP05423 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
POLR3DP05423 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
POLR3DP05423 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
POLR3DP05423 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
POLR3DP05423 AC023274.1-201ENST00000418278 595 ntBASIC20.56■□□□□ 0.88
POLR3DP05423 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC20.56■□□□□ 0.88
POLR3DP05423 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC20.56■□□□□ 0.88
POLR3DP05423 VN2R19P-201ENST00000442399 1052 ntBASIC20.56■□□□□ 0.88
POLR3DP05423 KRT18P2-201ENST00000447938 1258 ntBASIC20.56■□□□□ 0.88
POLR3DP05423 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC20.56■□□□□ 0.88
POLR3DP05423 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC20.56■□□□□ 0.88
POLR3DP05423 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC20.56■□□□□ 0.88
POLR3DP05423 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC20.56■□□□□ 0.88
POLR3DP05423 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC20.56■□□□□ 0.88
POLR3DP05423 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
POLR3DP05423 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
POLR3DP05423 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
POLR3DP05423 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC20.55■□□□□ 0.88
POLR3DP05423 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
POLR3DP05423 CEP83-AS1-201ENST00000623122 2482 ntBASIC20.55■□□□□ 0.88
POLR3DP05423 AL590787.1-201ENST00000568856 1315 ntBASIC20.55■□□□□ 0.88
POLR3DP05423 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
POLR3DP05423 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
POLR3DP05423 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
POLR3DP05423 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
POLR3DP05423 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
POLR3DP05423 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
POLR3DP05423 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
POLR3DP05423 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
POLR3DP05423 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC20.55■□□□□ 0.88
POLR3DP05423 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
POLR3DP05423 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC20.55■□□□□ 0.88
POLR3DP05423 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC20.55■□□□□ 0.88
POLR3DP05423 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC20.55■□□□□ 0.88
POLR3DP05423 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
POLR3DP05423 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC20.55■□□□□ 0.88
POLR3DP05423 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC20.55■□□□□ 0.88
POLR3DP05423 GGTLC5P-201ENST00000617623 998 ntBASIC20.55■□□□□ 0.88
POLR3DP05423 AC139530.3-201ENST00000620344 690 ntBASIC20.55■□□□□ 0.88
POLR3DP05423 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC20.55■□□□□ 0.88
POLR3DP05423 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
POLR3DP05423 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
POLR3DP05423 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC20.55■□□□□ 0.88
POLR3DP05423 PI4KAP1-204ENST00000612579 1703 ntBASIC20.55■□□□□ 0.88
POLR3DP05423 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
POLR3DP05423 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
POLR3DP05423 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
POLR3DP05423 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
POLR3DP05423 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
POLR3DP05423 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms