Protein–RNA interactions for Protein: P05114

HMGN1, Non-histone chromosomal protein HMG-14, humanhuman

Predictions only

Length 100 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P05114 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
HMGN1P05114 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
HMGN1P05114 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC15.64■□□□□ 0.09
HMGN1P05114 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC15.64■□□□□ 0.09
HMGN1P05114 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
HMGN1P05114 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
HMGN1P05114 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC15.64■□□□□ 0.09
HMGN1P05114 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
HMGN1P05114 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
HMGN1P05114 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
HMGN1P05114 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC15.64■□□□□ 0.09
HMGN1P05114 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
HMGN1P05114 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
HMGN1P05114 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
HMGN1P05114 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC15.64■□□□□ 0.09
HMGN1P05114 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
HMGN1P05114 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
HMGN1P05114 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC15.63■□□□□ 0.09
HMGN1P05114 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC15.63■□□□□ 0.09
HMGN1P05114 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
HMGN1P05114 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC15.63■□□□□ 0.09
HMGN1P05114 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
HMGN1P05114 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
HMGN1P05114 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
HMGN1P05114 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
HMGN1P05114 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
HMGN1P05114 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC15.63■□□□□ 0.09
HMGN1P05114 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC15.63■□□□□ 0.09
HMGN1P05114 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
HMGN1P05114 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC15.63■□□□□ 0.09
HMGN1P05114 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
HMGN1P05114 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
HMGN1P05114 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC15.63■□□□□ 0.09
HMGN1P05114 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
HMGN1P05114 AC007967.3-201ENST00000434308 558 ntBASIC15.63■□□□□ 0.09
HMGN1P05114 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
HMGN1P05114 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC15.63■□□□□ 0.09
HMGN1P05114 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC15.63■□□□□ 0.09
HMGN1P05114 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC15.63■□□□□ 0.09
HMGN1P05114 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
HMGN1P05114 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
HMGN1P05114 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
HMGN1P05114 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
HMGN1P05114 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
HMGN1P05114 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
HMGN1P05114 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
HMGN1P05114 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
HMGN1P05114 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
HMGN1P05114 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
HMGN1P05114 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
HMGN1P05114 PKD1P5-201ENST00000532415 10291 ntBASIC15.63■□□□□ 0.09
HMGN1P05114 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
HMGN1P05114 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
HMGN1P05114 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC15.62■□□□□ 0.09
HMGN1P05114 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
HMGN1P05114 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
HMGN1P05114 ACE-204ENST00000428043 5120 ntTSL 2 BASIC15.62■□□□□ 0.09
HMGN1P05114 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
HMGN1P05114 AC078925.2-201ENST00000624013 1973 ntBASIC15.62■□□□□ 0.09
HMGN1P05114 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
HMGN1P05114 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC15.62■□□□□ 0.09
HMGN1P05114 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC15.62■□□□□ 0.09
HMGN1P05114 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
HMGN1P05114 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC15.62■□□□□ 0.09
HMGN1P05114 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
HMGN1P05114 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
HMGN1P05114 BAALC-202ENST00000306391 243 ntTSL 5 BASIC15.62■□□□□ 0.09
HMGN1P05114 BAALC-204ENST00000330955 222 ntTSL 5 BASIC15.62■□□□□ 0.09
HMGN1P05114 HBZP1-201ENST00000354915 429 ntBASIC15.62■□□□□ 0.09
HMGN1P05114 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC15.62■□□□□ 0.09
HMGN1P05114 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
HMGN1P05114 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
HMGN1P05114 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC15.62■□□□□ 0.09
HMGN1P05114 FGF14-AS2-201ENST00000606448 1074 ntBASIC15.62■□□□□ 0.09
HMGN1P05114 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
HMGN1P05114 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC15.62■□□□□ 0.09
HMGN1P05114 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC15.62■□□□□ 0.09
HMGN1P05114 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
HMGN1P05114 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC15.62■□□□□ 0.09
HMGN1P05114 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC15.62■□□□□ 0.09
HMGN1P05114 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
HMGN1P05114 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
HMGN1P05114 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
HMGN1P05114 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
HMGN1P05114 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC15.62■□□□□ 0.09
HMGN1P05114 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC15.62■□□□□ 0.09
HMGN1P05114 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
HMGN1P05114 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC15.62■□□□□ 0.09
HMGN1P05114 AC092068.3-201ENST00000587894 2016 ntBASIC15.61■□□□□ 0.09
HMGN1P05114 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC15.61■□□□□ 0.09
HMGN1P05114 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
HMGN1P05114 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC15.61■□□□□ 0.09
HMGN1P05114 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
HMGN1P05114 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC15.61■□□□□ 0.09
HMGN1P05114 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
HMGN1P05114 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC15.61■□□□□ 0.09
HMGN1P05114 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
HMGN1P05114 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
HMGN1P05114 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
HMGN1P05114 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms