Protein–RNA interactions for Protein: P05067

APP, Amyloid-beta A4 protein, humanhuman

Predictions only

Length 770 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APPP05067 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
APPP05067 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC20.68■□□□□ 0.9
APPP05067 CSF3-203ENST00000394148 622 ntTSL 3 BASIC20.68■□□□□ 0.9
APPP05067 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC20.68■□□□□ 0.9
APPP05067 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC20.68■□□□□ 0.9
APPP05067 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC20.68■□□□□ 0.9
APPP05067 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
APPP05067 AL356488.2-201ENST00000602755 427 ntBASIC20.68■□□□□ 0.9
APPP05067 AL139424.1-201ENST00000607572 797 ntBASIC20.68■□□□□ 0.9
APPP05067 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC20.68■□□□□ 0.9
APPP05067 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC20.68■□□□□ 0.9
APPP05067 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC20.68■□□□□ 0.9
APPP05067 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC20.68■□□□□ 0.9
APPP05067 IL9RP2-201ENST00000423948 1312 ntBASIC20.68■□□□□ 0.9
APPP05067 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
APPP05067 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC20.68■□□□□ 0.9
APPP05067 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
APPP05067 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC20.68■□□□□ 0.9
APPP05067 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC20.68■□□□□ 0.9
APPP05067 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
APPP05067 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
APPP05067 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC20.68■□□□□ 0.9
APPP05067 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
APPP05067 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
APPP05067 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
APPP05067 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC20.67■□□□□ 0.9
APPP05067 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
APPP05067 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
APPP05067 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC20.67■□□□□ 0.9
APPP05067 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC20.67■□□□□ 0.9
APPP05067 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
APPP05067 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
APPP05067 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
APPP05067 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC20.67■□□□□ 0.9
APPP05067 ACTG1P4-201ENST00000425123 1122 ntBASIC20.67■□□□□ 0.9
APPP05067 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC20.67■□□□□ 0.9
APPP05067 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC20.67■□□□□ 0.9
APPP05067 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC20.67■□□□□ 0.9
APPP05067 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC20.67■□□□□ 0.9
APPP05067 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
APPP05067 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC20.67■□□□□ 0.9
APPP05067 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC20.67■□□□□ 0.9
APPP05067 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
APPP05067 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
APPP05067 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
APPP05067 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
APPP05067 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
APPP05067 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC20.66■□□□□ 0.9
APPP05067 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC20.66■□□□□ 0.9
APPP05067 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
APPP05067 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC20.66■□□□□ 0.9
APPP05067 ELK2BP-201ENST00000415014 1224 ntBASIC20.66■□□□□ 0.9
APPP05067 AC098831.1-202ENST00000438821 336 ntBASIC20.66■□□□□ 0.9
APPP05067 ARTN-206ENST00000472435 402 ntTSL 3 BASIC20.66■□□□□ 0.9
APPP05067 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC20.66■□□□□ 0.9
APPP05067 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC20.66■□□□□ 0.9
APPP05067 RPS29-206ENST00000557111 488 ntTSL 2 BASIC20.66■□□□□ 0.9
APPP05067 AL353135.1-201ENST00000606729 504 ntBASIC20.66■□□□□ 0.9
APPP05067 BX640515.1-201ENST00000617215 977 ntBASIC20.66■□□□□ 0.9
APPP05067 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC20.66■□□□□ 0.9
APPP05067 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
APPP05067 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
APPP05067 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC20.66■□□□□ 0.9
APPP05067 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
APPP05067 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC20.66■□□□□ 0.9
APPP05067 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
APPP05067 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
APPP05067 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
APPP05067 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
APPP05067 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
APPP05067 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
APPP05067 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
APPP05067 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
APPP05067 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
APPP05067 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC20.65■□□□□ 0.9
APPP05067 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC20.65■□□□□ 0.9
APPP05067 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC20.65■□□□□ 0.9
APPP05067 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
APPP05067 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC20.65■□□□□ 0.9
APPP05067 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC20.65■□□□□ 0.9
APPP05067 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC20.65■□□□□ 0.9
APPP05067 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC20.65■□□□□ 0.9
APPP05067 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
APPP05067 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
APPP05067 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
APPP05067 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
APPP05067 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
APPP05067 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC20.65■□□□□ 0.9
APPP05067 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
APPP05067 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC20.65■□□□□ 0.9
APPP05067 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
APPP05067 AC073621.1-201ENST00000392730 636 ntBASIC20.65■□□□□ 0.9
APPP05067 KRT18P27-201ENST00000427733 1299 ntBASIC20.65■□□□□ 0.9
APPP05067 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC20.65■□□□□ 0.9
APPP05067 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
APPP05067 AC136632.2-201ENST00000512891 861 ntBASIC20.65■□□□□ 0.9
APPP05067 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC20.65■□□□□ 0.9
APPP05067 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
APPP05067 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC20.65■□□□□ 0.9
APPP05067 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC20.65■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms