Protein–RNA interactions for Protein: P05060

CHGB, Secretogranin-1, humanhuman

Predictions only

Length 677 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHGBP05060 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CHGBP05060 AC018845.2-201ENST00000568326 409 ntBASIC20.63■□□□□ 0.89
CHGBP05060 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CHGBP05060 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC20.63■□□□□ 0.89
CHGBP05060 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC20.63■□□□□ 0.89
CHGBP05060 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CHGBP05060 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC20.63■□□□□ 0.89
CHGBP05060 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
CHGBP05060 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
CHGBP05060 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC20.63■□□□□ 0.89
CHGBP05060 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CHGBP05060 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CHGBP05060 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
CHGBP05060 PCDHA12-202ENST00000613593 2588 ntBASIC20.62■□□□□ 0.89
CHGBP05060 AC002310.6-201ENST00000624451 1377 ntBASIC20.62■□□□□ 0.89
CHGBP05060 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC20.62■□□□□ 0.89
CHGBP05060 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC20.62■□□□□ 0.89
CHGBP05060 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CHGBP05060 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
CHGBP05060 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
CHGBP05060 NABP1-203ENST00000409510 843 ntTSL 5 BASIC20.62■□□□□ 0.89
CHGBP05060 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC20.62■□□□□ 0.89
CHGBP05060 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC20.62■□□□□ 0.89
CHGBP05060 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC20.62■□□□□ 0.89
CHGBP05060 PGAM5P1-201ENST00000518923 814 ntBASIC20.62■□□□□ 0.89
CHGBP05060 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC20.62■□□□□ 0.89
CHGBP05060 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC20.62■□□□□ 0.89
CHGBP05060 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC20.62■□□□□ 0.89
CHGBP05060 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
CHGBP05060 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CHGBP05060 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CHGBP05060 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CHGBP05060 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC20.62■□□□□ 0.89
CHGBP05060 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CHGBP05060 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
CHGBP05060 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
CHGBP05060 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC20.61■□□□□ 0.89
CHGBP05060 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC20.61■□□□□ 0.89
CHGBP05060 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CHGBP05060 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC20.61■□□□□ 0.89
CHGBP05060 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
CHGBP05060 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CHGBP05060 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
CHGBP05060 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC20.61■□□□□ 0.89
CHGBP05060 HCG4B-203ENST00000450128 991 ntBASIC20.61■□□□□ 0.89
CHGBP05060 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC20.61■□□□□ 0.89
CHGBP05060 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC20.61■□□□□ 0.89
CHGBP05060 MIR4751-201ENST00000578027 74 ntBASIC20.61■□□□□ 0.89
CHGBP05060 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC20.61■□□□□ 0.89
CHGBP05060 AC064836.3-201ENST00000607928 673 ntBASIC20.61■□□□□ 0.89
CHGBP05060 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
CHGBP05060 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC20.61■□□□□ 0.89
CHGBP05060 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC20.61■□□□□ 0.89
CHGBP05060 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC20.61■□□□□ 0.89
CHGBP05060 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CHGBP05060 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC20.61■□□□□ 0.89
CHGBP05060 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC20.61■□□□□ 0.89
CHGBP05060 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC20.61■□□□□ 0.89
CHGBP05060 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC20.61■□□□□ 0.89
CHGBP05060 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
CHGBP05060 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CHGBP05060 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CHGBP05060 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CHGBP05060 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
CHGBP05060 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC20.6■□□□□ 0.89
CHGBP05060 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CHGBP05060 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC20.6■□□□□ 0.89
CHGBP05060 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CHGBP05060 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CHGBP05060 AC107918.2-201ENST00000530817 355 ntBASIC20.6■□□□□ 0.89
CHGBP05060 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CHGBP05060 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CHGBP05060 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC20.6■□□□□ 0.89
CHGBP05060 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
CHGBP05060 NF2-208ENST00000403435 2568 ntTSL 5 BASIC20.6■□□□□ 0.89
CHGBP05060 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
CHGBP05060 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CHGBP05060 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CHGBP05060 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CHGBP05060 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
CHGBP05060 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CHGBP05060 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CHGBP05060 ZNF259P1-201ENST00000407656 1365 ntBASIC20.59■□□□□ 0.89
CHGBP05060 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CHGBP05060 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
CHGBP05060 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC20.59■□□□□ 0.89
CHGBP05060 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CHGBP05060 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC20.59■□□□□ 0.89
CHGBP05060 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CHGBP05060 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC20.59■□□□□ 0.89
CHGBP05060 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CHGBP05060 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
CHGBP05060 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC20.59■□□□□ 0.89
CHGBP05060 CRCP-205ENST00000431089 942 ntTSL 2 BASIC20.59■□□□□ 0.89
CHGBP05060 VN2R19P-201ENST00000442399 1052 ntBASIC20.59■□□□□ 0.89
CHGBP05060 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC20.59■□□□□ 0.89
CHGBP05060 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC20.59■□□□□ 0.89
CHGBP05060 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC20.59■□□□□ 0.89
CHGBP05060 PGM5P2-202ENST00000637225 1043 ntBASIC20.59■□□□□ 0.89
CHGBP05060 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 44.2 ms