Protein–RNA interactions for Protein: P03886

MT-ND1, NADH-ubiquinone oxidoreductase chain 1, humanhuman

Predictions only

Length 318 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND1P03886 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
MT-ND1P03886 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
MT-ND1P03886 CD70-202ENST00000423145 881 ntTSL 2 BASIC16.3■□□□□ 0.2
MT-ND1P03886 LIN28AP1-201ENST00000429574 405 ntBASIC16.3■□□□□ 0.2
MT-ND1P03886 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
MT-ND1P03886 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
MT-ND1P03886 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC16.3■□□□□ 0.2
MT-ND1P03886 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC16.3■□□□□ 0.2
MT-ND1P03886 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC16.3■□□□□ 0.2
MT-ND1P03886 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC16.3■□□□□ 0.2
MT-ND1P03886 TK1-204ENST00000590430 683 ntTSL 3 BASIC16.3■□□□□ 0.2
MT-ND1P03886 AC024563.2-201ENST00000603282 481 ntBASIC16.3■□□□□ 0.2
MT-ND1P03886 AC140113.3-201ENST00000605663 199 ntBASIC16.3■□□□□ 0.2
MT-ND1P03886 AL031432.5-201ENST00000641059 760 ntBASIC16.3■□□□□ 0.2
MT-ND1P03886 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
MT-ND1P03886 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC16.3■□□□□ 0.2
MT-ND1P03886 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
MT-ND1P03886 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC16.3■□□□□ 0.2
MT-ND1P03886 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
MT-ND1P03886 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
MT-ND1P03886 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC16.3■□□□□ 0.2
MT-ND1P03886 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
MT-ND1P03886 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC16.3■□□□□ 0.2
MT-ND1P03886 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC16.3■□□□□ 0.2
MT-ND1P03886 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
MT-ND1P03886 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
MT-ND1P03886 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
MT-ND1P03886 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
MT-ND1P03886 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
MT-ND1P03886 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
MT-ND1P03886 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
MT-ND1P03886 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC16.29■□□□□ 0.2
MT-ND1P03886 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC16.29■□□□□ 0.2
MT-ND1P03886 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
MT-ND1P03886 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
MT-ND1P03886 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC16.29■□□□□ 0.2
MT-ND1P03886 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC16.29■□□□□ 0.2
MT-ND1P03886 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
MT-ND1P03886 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
MT-ND1P03886 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
MT-ND1P03886 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
MT-ND1P03886 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC16.29■□□□□ 0.2
MT-ND1P03886 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC16.29■□□□□ 0.2
MT-ND1P03886 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC16.29■□□□□ 0.2
MT-ND1P03886 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
MT-ND1P03886 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC16.29■□□□□ 0.2
MT-ND1P03886 RASA4DP-201ENST00000460726 1199 ntBASIC16.29■□□□□ 0.2
MT-ND1P03886 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
MT-ND1P03886 AC112698.1-201ENST00000510299 916 ntBASIC16.29■□□□□ 0.2
MT-ND1P03886 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
MT-ND1P03886 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC16.29■□□□□ 0.2
MT-ND1P03886 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
MT-ND1P03886 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC16.29■□□□□ 0.2
MT-ND1P03886 AL023973.1-201ENST00000624619 620 ntBASIC16.29■□□□□ 0.2
MT-ND1P03886 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
MT-ND1P03886 AC068418.2-201ENST00000577309 3703 ntBASIC16.29■□□□□ 0.2
MT-ND1P03886 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
MT-ND1P03886 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
MT-ND1P03886 AC007950.2-201ENST00000615045 2347 ntBASIC16.29■□□□□ 0.2
MT-ND1P03886 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
MT-ND1P03886 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
MT-ND1P03886 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC16.29■□□□□ 0.2
MT-ND1P03886 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
MT-ND1P03886 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
MT-ND1P03886 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
MT-ND1P03886 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
MT-ND1P03886 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
MT-ND1P03886 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
MT-ND1P03886 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC16.29■□□□□ 0.2
MT-ND1P03886 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC16.28■□□□□ 0.2
MT-ND1P03886 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
MT-ND1P03886 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
MT-ND1P03886 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
MT-ND1P03886 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC16.28■□□□□ 0.2
MT-ND1P03886 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
MT-ND1P03886 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
MT-ND1P03886 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
MT-ND1P03886 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
MT-ND1P03886 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC16.28■□□□□ 0.2
MT-ND1P03886 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
MT-ND1P03886 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC16.28■□□□□ 0.2
MT-ND1P03886 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
MT-ND1P03886 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
MT-ND1P03886 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
MT-ND1P03886 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
MT-ND1P03886 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
MT-ND1P03886 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC16.28■□□□□ 0.2
MT-ND1P03886 ATP5G1P1-201ENST00000448724 379 ntBASIC16.28■□□□□ 0.2
MT-ND1P03886 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
MT-ND1P03886 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC16.28■□□□□ 0.2
MT-ND1P03886 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
MT-ND1P03886 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
MT-ND1P03886 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
MT-ND1P03886 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
MT-ND1P03886 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
MT-ND1P03886 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC16.28■□□□□ 0.2
MT-ND1P03886 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC16.28■□□□□ 0.2
MT-ND1P03886 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC16.28■□□□□ 0.2
MT-ND1P03886 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
MT-ND1P03886 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 61.5 ms