Protein–RNA interactions for Protein: O95170

CDRT1, CMT1A duplicated region transcript 1 protein, humanhuman

Predictions only

Length 752 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1O95170 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
CDRT1O95170 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
CDRT1O95170 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC15.42■□□□□ 0.06
CDRT1O95170 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CDRT1O95170 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
CDRT1O95170 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
CDRT1O95170 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
CDRT1O95170 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC15.42■□□□□ 0.06
CDRT1O95170 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CDRT1O95170 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC15.42■□□□□ 0.06
CDRT1O95170 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC15.42■□□□□ 0.06
CDRT1O95170 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC15.42■□□□□ 0.06
CDRT1O95170 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC15.42■□□□□ 0.06
CDRT1O95170 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CDRT1O95170 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC15.42■□□□□ 0.06
CDRT1O95170 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC15.42■□□□□ 0.06
CDRT1O95170 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CDRT1O95170 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CDRT1O95170 AC092364.2-201ENST00000596710 2692 ntBASIC15.41■□□□□ 0.06
CDRT1O95170 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
CDRT1O95170 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
CDRT1O95170 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
CDRT1O95170 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
CDRT1O95170 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
CDRT1O95170 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
CDRT1O95170 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC15.41■□□□□ 0.06
CDRT1O95170 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
CDRT1O95170 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
CDRT1O95170 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC15.41■□□□□ 0.06
CDRT1O95170 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CDRT1O95170 KRT8P47-201ENST00000604727 1398 ntBASIC15.41■□□□□ 0.06
CDRT1O95170 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC15.41■□□□□ 0.06
CDRT1O95170 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC15.41■□□□□ 0.06
CDRT1O95170 AC093525.9-201ENST00000624961 1746 ntBASIC15.41■□□□□ 0.06
CDRT1O95170 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
CDRT1O95170 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
CDRT1O95170 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC15.41■□□□□ 0.06
CDRT1O95170 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC15.41■□□□□ 0.06
CDRT1O95170 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC15.41■□□□□ 0.06
CDRT1O95170 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CDRT1O95170 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CDRT1O95170 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
CDRT1O95170 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CDRT1O95170 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CDRT1O95170 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CDRT1O95170 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CDRT1O95170 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CDRT1O95170 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CDRT1O95170 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC15.41■□□□□ 0.06
CDRT1O95170 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC15.41■□□□□ 0.06
CDRT1O95170 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
CDRT1O95170 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC15.41■□□□□ 0.06
CDRT1O95170 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC15.41■□□□□ 0.06
CDRT1O95170 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
CDRT1O95170 AC008687.5-201ENST00000593746 558 ntBASIC15.41■□□□□ 0.06
CDRT1O95170 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC15.41■□□□□ 0.06
CDRT1O95170 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CDRT1O95170 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
CDRT1O95170 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CDRT1O95170 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC15.41■□□□□ 0.06
CDRT1O95170 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CDRT1O95170 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
CDRT1O95170 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC15.41■□□□□ 0.06
CDRT1O95170 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
CDRT1O95170 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
CDRT1O95170 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
CDRT1O95170 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC15.41■□□□□ 0.06
CDRT1O95170 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC15.41■□□□□ 0.06
CDRT1O95170 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CDRT1O95170 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
CDRT1O95170 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
CDRT1O95170 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
CDRT1O95170 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC15.4■□□□□ 0.06
CDRT1O95170 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
CDRT1O95170 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CDRT1O95170 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC15.4■□□□□ 0.06
CDRT1O95170 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
CDRT1O95170 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CDRT1O95170 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC15.4■□□□□ 0.06
CDRT1O95170 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CDRT1O95170 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CDRT1O95170 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC15.4■□□□□ 0.06
CDRT1O95170 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CDRT1O95170 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC15.4■□□□□ 0.06
CDRT1O95170 SEC1P-202ENST00000473944 940 ntBASIC15.4■□□□□ 0.06
CDRT1O95170 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC15.4■□□□□ 0.06
CDRT1O95170 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CDRT1O95170 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC15.4■□□□□ 0.06
CDRT1O95170 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC15.4■□□□□ 0.06
CDRT1O95170 REEP1-209ENST00000541910 969 ntTSL 2 BASIC15.4■□□□□ 0.06
CDRT1O95170 AL355075.4-201ENST00000554988 638 ntBASIC15.4■□□□□ 0.06
CDRT1O95170 AC010653.2-201ENST00000623505 997 ntBASIC15.4■□□□□ 0.06
CDRT1O95170 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CDRT1O95170 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CDRT1O95170 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CDRT1O95170 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC15.4■□□□□ 0.06
CDRT1O95170 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CDRT1O95170 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CDRT1O95170 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
CDRT1O95170 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 47 ms