Protein–RNA interactions for Protein: O75427

LRCH4, Leucine-rich repeat and calponin homology domain-containing protein 4, humanhuman

Predictions only

Length 683 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH4O75427 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
LRCH4O75427 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
LRCH4O75427 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
LRCH4O75427 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC17.91■□□□□ 0.46
LRCH4O75427 FLJ38576-201ENST00000623820 2459 ntBASIC17.91■□□□□ 0.46
LRCH4O75427 PAN3-AS1-201ENST00000563843 1351 ntBASIC17.91■□□□□ 0.46
LRCH4O75427 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC17.9■□□□□ 0.46
LRCH4O75427 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
LRCH4O75427 HNRNPRP1-201ENST00000453465 1695 ntBASIC17.9■□□□□ 0.46
LRCH4O75427 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC17.9■□□□□ 0.46
LRCH4O75427 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC17.9■□□□□ 0.46
LRCH4O75427 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
LRCH4O75427 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
LRCH4O75427 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
LRCH4O75427 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
LRCH4O75427 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
LRCH4O75427 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
LRCH4O75427 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
LRCH4O75427 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
LRCH4O75427 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
LRCH4O75427 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC17.9■□□□□ 0.46
LRCH4O75427 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
LRCH4O75427 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
LRCH4O75427 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
LRCH4O75427 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
LRCH4O75427 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC17.9■□□□□ 0.46
LRCH4O75427 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC17.9■□□□□ 0.46
LRCH4O75427 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
LRCH4O75427 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
LRCH4O75427 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC17.9■□□□□ 0.46
LRCH4O75427 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
LRCH4O75427 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC17.9■□□□□ 0.46
LRCH4O75427 AC078925.2-201ENST00000624013 1973 ntBASIC17.9■□□□□ 0.46
LRCH4O75427 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
LRCH4O75427 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
LRCH4O75427 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
LRCH4O75427 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
LRCH4O75427 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
LRCH4O75427 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC17.89■□□□□ 0.46
LRCH4O75427 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC17.89■□□□□ 0.46
LRCH4O75427 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
LRCH4O75427 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC17.89■□□□□ 0.45
LRCH4O75427 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
LRCH4O75427 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
LRCH4O75427 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
LRCH4O75427 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC17.89■□□□□ 0.45
LRCH4O75427 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
LRCH4O75427 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC17.89■□□□□ 0.45
LRCH4O75427 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC17.89■□□□□ 0.45
LRCH4O75427 KRT18P56-201ENST00000507275 550 ntBASIC17.89■□□□□ 0.45
LRCH4O75427 SDHD-206ENST00000528182 754 ntTSL 3 BASIC17.89■□□□□ 0.45
LRCH4O75427 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
LRCH4O75427 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC17.89■□□□□ 0.45
LRCH4O75427 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
LRCH4O75427 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
LRCH4O75427 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
LRCH4O75427 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
LRCH4O75427 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
LRCH4O75427 AL590787.1-201ENST00000568856 1315 ntBASIC17.89■□□□□ 0.45
LRCH4O75427 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
LRCH4O75427 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
LRCH4O75427 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC17.89■□□□□ 0.45
LRCH4O75427 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
LRCH4O75427 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
LRCH4O75427 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
LRCH4O75427 NCF1C-201ENST00000438382 1427 ntBASIC17.89■□□□□ 0.45
LRCH4O75427 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC17.88■□□□□ 0.45
LRCH4O75427 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
LRCH4O75427 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
LRCH4O75427 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
LRCH4O75427 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
LRCH4O75427 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC17.88■□□□□ 0.45
LRCH4O75427 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
LRCH4O75427 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC17.88■□□□□ 0.45
LRCH4O75427 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
LRCH4O75427 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC17.88■□□□□ 0.45
LRCH4O75427 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
LRCH4O75427 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC17.88■□□□□ 0.45
LRCH4O75427 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
LRCH4O75427 AP002414.1-201ENST00000391405 1147 ntBASIC17.88■□□□□ 0.45
LRCH4O75427 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
LRCH4O75427 SAPCD2P3-201ENST00000455031 850 ntBASIC17.88■□□□□ 0.45
LRCH4O75427 AF238378.1-201ENST00000526806 358 ntBASIC17.88■□□□□ 0.45
LRCH4O75427 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC17.88■□□□□ 0.45
LRCH4O75427 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
LRCH4O75427 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC17.88■□□□□ 0.45
LRCH4O75427 DUX4L17-201ENST00000557360 1267 ntBASIC17.88■□□□□ 0.45
LRCH4O75427 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC17.88■□□□□ 0.45
LRCH4O75427 CA12-203ENST00000422263 2556 ntTSL 2 BASIC17.88■□□□□ 0.45
LRCH4O75427 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
LRCH4O75427 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
LRCH4O75427 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
LRCH4O75427 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
LRCH4O75427 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
LRCH4O75427 OR6D1P-202ENST00000641007 5290 ntBASIC17.88■□□□□ 0.45
LRCH4O75427 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
LRCH4O75427 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
LRCH4O75427 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
LRCH4O75427 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC17.88■□□□□ 0.45
LRCH4O75427 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms