Protein–RNA interactions for Protein: O75309

CDH16, Cadherin-16, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH16O75309 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CDH16O75309 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
CDH16O75309 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
CDH16O75309 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
CDH16O75309 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CDH16O75309 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC17.44■□□□□ 0.38
CDH16O75309 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC17.44■□□□□ 0.38
CDH16O75309 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CDH16O75309 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
CDH16O75309 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CDH16O75309 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CDH16O75309 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CDH16O75309 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CDH16O75309 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CDH16O75309 FUK-207ENST00000571514 3054 ntTSL 2 BASIC17.44■□□□□ 0.38
CDH16O75309 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC17.44■□□□□ 0.38
CDH16O75309 AC011270.2-201ENST00000624293 2550 ntBASIC17.43■□□□□ 0.38
CDH16O75309 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CDH16O75309 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC17.43■□□□□ 0.38
CDH16O75309 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC17.43■□□□□ 0.38
CDH16O75309 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC17.43■□□□□ 0.38
CDH16O75309 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC17.43■□□□□ 0.38
CDH16O75309 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CDH16O75309 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC17.43■□□□□ 0.38
CDH16O75309 LINC01568-207ENST00000641790 1380 ntBASIC17.43■□□□□ 0.38
CDH16O75309 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC17.43■□□□□ 0.38
CDH16O75309 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
CDH16O75309 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC17.43■□□□□ 0.38
CDH16O75309 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CDH16O75309 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
CDH16O75309 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC17.43■□□□□ 0.38
CDH16O75309 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC17.43■□□□□ 0.38
CDH16O75309 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CDH16O75309 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC17.43■□□□□ 0.38
CDH16O75309 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
CDH16O75309 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC17.43■□□□□ 0.38
CDH16O75309 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
CDH16O75309 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CDH16O75309 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC17.43■□□□□ 0.38
CDH16O75309 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC17.43■□□□□ 0.38
CDH16O75309 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC17.43■□□□□ 0.38
CDH16O75309 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC17.43■□□□□ 0.38
CDH16O75309 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
CDH16O75309 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CDH16O75309 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC17.43■□□□□ 0.38
CDH16O75309 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC17.43■□□□□ 0.38
CDH16O75309 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC17.43■□□□□ 0.38
CDH16O75309 NAA38-203ENST00000575071 553 ntTSL 2 BASIC17.43■□□□□ 0.38
CDH16O75309 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
CDH16O75309 LITAF-220ENST00000620789 692 ntTSL 5 BASIC17.43■□□□□ 0.38
CDH16O75309 CLN6-221ENST00000637494 765 ntTSL 5 BASIC17.43■□□□□ 0.38
CDH16O75309 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
CDH16O75309 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CDH16O75309 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CDH16O75309 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CDH16O75309 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
CDH16O75309 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CDH16O75309 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
CDH16O75309 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
CDH16O75309 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC17.43■□□□□ 0.38
CDH16O75309 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CDH16O75309 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CDH16O75309 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CDH16O75309 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC17.43■□□□□ 0.38
CDH16O75309 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CDH16O75309 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CDH16O75309 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CDH16O75309 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CDH16O75309 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
CDH16O75309 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC17.42■□□□□ 0.38
CDH16O75309 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC17.42■□□□□ 0.38
CDH16O75309 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC17.42■□□□□ 0.38
CDH16O75309 AL353692.3-201ENST00000407031 1396 ntBASIC17.42■□□□□ 0.38
CDH16O75309 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CDH16O75309 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CDH16O75309 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC17.42■□□□□ 0.38
CDH16O75309 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC17.42■□□□□ 0.38
CDH16O75309 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CDH16O75309 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CDH16O75309 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC17.42■□□□□ 0.38
CDH16O75309 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC17.42■□□□□ 0.38
CDH16O75309 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CDH16O75309 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC17.42■□□□□ 0.38
CDH16O75309 AC012306.2-201ENST00000609350 630 ntBASIC17.42■□□□□ 0.38
CDH16O75309 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC17.42■□□□□ 0.38
CDH16O75309 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC17.42■□□□□ 0.38
CDH16O75309 AC141257.4-201ENST00000634557 245 ntBASIC17.42■□□□□ 0.38
CDH16O75309 AC136944.6-201ENST00000634818 245 ntBASIC17.42■□□□□ 0.38
CDH16O75309 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC17.42■□□□□ 0.38
CDH16O75309 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CDH16O75309 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CDH16O75309 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CDH16O75309 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC17.42■□□□□ 0.38
CDH16O75309 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CDH16O75309 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CDH16O75309 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
CDH16O75309 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CDH16O75309 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC17.42■□□□□ 0.38
CDH16O75309 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC17.42■□□□□ 0.38
CDH16O75309 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC17.42■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms