Protein–RNA interactions for Protein: O60294

LCMT2, tRNA wybutosine-synthesizing protein 4, humanhuman

Known RBP Predictions only

Length 686 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCMT2O60294 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC16.47■□□□□ 0.23
LCMT2O60294 FDX1P1-201ENST00000449115 551 ntBASIC16.47■□□□□ 0.23
LCMT2O60294 ARTN-206ENST00000472435 402 ntTSL 3 BASIC16.47■□□□□ 0.23
LCMT2O60294 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC16.47■□□□□ 0.23
LCMT2O60294 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC16.47■□□□□ 0.23
LCMT2O60294 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC16.47■□□□□ 0.23
LCMT2O60294 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC16.47■□□□□ 0.23
LCMT2O60294 AC008735.5-201ENST00000623544 497 ntBASIC16.47■□□□□ 0.23
LCMT2O60294 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
LCMT2O60294 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
LCMT2O60294 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
LCMT2O60294 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
LCMT2O60294 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
LCMT2O60294 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
LCMT2O60294 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC16.47■□□□□ 0.23
LCMT2O60294 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
LCMT2O60294 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC16.47■□□□□ 0.23
LCMT2O60294 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
LCMT2O60294 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
LCMT2O60294 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
LCMT2O60294 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
LCMT2O60294 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
LCMT2O60294 HLA-A-201ENST00000376802 1334 ntBASIC16.46■□□□□ 0.23
LCMT2O60294 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
LCMT2O60294 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
LCMT2O60294 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC16.46■□□□□ 0.23
LCMT2O60294 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.23
LCMT2O60294 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC16.46■□□□□ 0.23
LCMT2O60294 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC16.46■□□□□ 0.23
LCMT2O60294 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC16.46■□□□□ 0.23
LCMT2O60294 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC16.46■□□□□ 0.23
LCMT2O60294 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
LCMT2O60294 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
LCMT2O60294 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
LCMT2O60294 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
LCMT2O60294 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC16.46■□□□□ 0.23
LCMT2O60294 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC16.46■□□□□ 0.23
LCMT2O60294 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
LCMT2O60294 CENPM-204ENST00000402420 688 ntTSL 5 BASIC16.46■□□□□ 0.23
LCMT2O60294 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC16.46■□□□□ 0.23
LCMT2O60294 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
LCMT2O60294 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC16.46■□□□□ 0.23
LCMT2O60294 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC16.46■□□□□ 0.23
LCMT2O60294 KLK8-205ENST00000593490 267 ntTSL 3 BASIC16.46■□□□□ 0.23
LCMT2O60294 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC16.46■□□□□ 0.23
LCMT2O60294 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
LCMT2O60294 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC16.46■□□□□ 0.23
LCMT2O60294 AP002414.3-201ENST00000589352 1468 ntBASIC16.46■□□□□ 0.23
LCMT2O60294 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
LCMT2O60294 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
LCMT2O60294 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
LCMT2O60294 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC16.46■□□□□ 0.22
LCMT2O60294 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
LCMT2O60294 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC16.46■□□□□ 0.22
LCMT2O60294 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC16.46■□□□□ 0.22
LCMT2O60294 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
LCMT2O60294 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
LCMT2O60294 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
LCMT2O60294 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
LCMT2O60294 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
LCMT2O60294 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
LCMT2O60294 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
LCMT2O60294 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
LCMT2O60294 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
LCMT2O60294 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
LCMT2O60294 RPS2P28-201ENST00000314255 741 ntBASIC16.45■□□□□ 0.22
LCMT2O60294 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
LCMT2O60294 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
LCMT2O60294 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC16.45■□□□□ 0.22
LCMT2O60294 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
LCMT2O60294 PTCHD3P3-201ENST00000403073 906 ntBASIC16.45■□□□□ 0.22
LCMT2O60294 ELK2BP-201ENST00000415014 1224 ntBASIC16.45■□□□□ 0.22
LCMT2O60294 AC026396.1-201ENST00000419388 421 ntBASIC16.45■□□□□ 0.22
LCMT2O60294 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
LCMT2O60294 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC16.45■□□□□ 0.22
LCMT2O60294 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC16.45■□□□□ 0.22
LCMT2O60294 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
LCMT2O60294 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC16.45■□□□□ 0.22
LCMT2O60294 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC16.45■□□□□ 0.22
LCMT2O60294 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC16.45■□□□□ 0.22
LCMT2O60294 AC105339.3-201ENST00000560043 636 ntBASIC16.45■□□□□ 0.22
LCMT2O60294 AC006557.2-201ENST00000592985 1240 ntBASIC16.45■□□□□ 0.22
LCMT2O60294 MIR7706-201ENST00000613747 67 ntBASIC16.45■□□□□ 0.22
LCMT2O60294 GPR89P-201ENST00000407924 1495 ntBASIC16.45■□□□□ 0.22
LCMT2O60294 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
LCMT2O60294 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC16.45■□□□□ 0.22
LCMT2O60294 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
LCMT2O60294 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC16.45■□□□□ 0.22
LCMT2O60294 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
LCMT2O60294 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC16.45■□□□□ 0.22
LCMT2O60294 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
LCMT2O60294 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
LCMT2O60294 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC16.45■□□□□ 0.22
LCMT2O60294 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
LCMT2O60294 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
LCMT2O60294 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC16.45■□□□□ 0.22
LCMT2O60294 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC16.45■□□□□ 0.22
LCMT2O60294 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
LCMT2O60294 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC16.45■□□□□ 0.22
LCMT2O60294 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC16.45■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms