Protein–RNA interactions for Protein: O43347

MSI1, RNA-binding protein Musashi homolog 1, humanhuman

Known RBP Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSI1O43347 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC17.87■□□□□ 0.45
MSI1O43347 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
MSI1O43347 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
MSI1O43347 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
MSI1O43347 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
MSI1O43347 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC17.86■□□□□ 0.45
MSI1O43347 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
MSI1O43347 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
MSI1O43347 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
MSI1O43347 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
MSI1O43347 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC17.86■□□□□ 0.45
MSI1O43347 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
MSI1O43347 LBH-204ENST00000406087 559 ntTSL 4 BASIC17.86■□□□□ 0.45
MSI1O43347 SLC4A1APP2-201ENST00000424054 1259 ntBASIC17.86■□□□□ 0.45
MSI1O43347 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
MSI1O43347 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
MSI1O43347 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
MSI1O43347 RIN3-211ENST00000557762 517 ntTSL 3 BASIC17.86■□□□□ 0.45
MSI1O43347 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
MSI1O43347 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC17.86■□□□□ 0.45
MSI1O43347 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC17.86■□□□□ 0.45
MSI1O43347 AC140113.2-201ENST00000604370 208 ntBASIC17.86■□□□□ 0.45
MSI1O43347 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
MSI1O43347 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
MSI1O43347 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC17.86■□□□□ 0.45
MSI1O43347 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC17.86■□□□□ 0.45
MSI1O43347 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
MSI1O43347 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
MSI1O43347 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
MSI1O43347 EGFEM1P-202ENST00000431685 1563 ntBASIC17.86■□□□□ 0.45
MSI1O43347 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
MSI1O43347 HNRNPRP1-201ENST00000453465 1695 ntBASIC17.86■□□□□ 0.45
MSI1O43347 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
MSI1O43347 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
MSI1O43347 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC17.86■□□□□ 0.45
MSI1O43347 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC17.86■□□□□ 0.45
MSI1O43347 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
MSI1O43347 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC17.85■□□□□ 0.45
MSI1O43347 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
MSI1O43347 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
MSI1O43347 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
MSI1O43347 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
MSI1O43347 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
MSI1O43347 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
MSI1O43347 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
MSI1O43347 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
MSI1O43347 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC17.85■□□□□ 0.45
MSI1O43347 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
MSI1O43347 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
MSI1O43347 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
MSI1O43347 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
MSI1O43347 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC17.85■□□□□ 0.45
MSI1O43347 MED15P5-201ENST00000423150 992 ntBASIC17.85■□□□□ 0.45
MSI1O43347 PMS2P1-201ENST00000431037 1228 ntBASIC17.85■□□□□ 0.45
MSI1O43347 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
MSI1O43347 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
MSI1O43347 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
MSI1O43347 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
MSI1O43347 CIPC-205ENST00000555437 566 ntTSL 3 BASIC17.85■□□□□ 0.45
MSI1O43347 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
MSI1O43347 TERC-201ENST00000602385 541 ntBASIC17.85■□□□□ 0.45
MSI1O43347 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
MSI1O43347 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC17.85■□□□□ 0.45
MSI1O43347 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
MSI1O43347 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
MSI1O43347 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
MSI1O43347 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
MSI1O43347 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
MSI1O43347 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
MSI1O43347 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC17.84■□□□□ 0.45
MSI1O43347 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
MSI1O43347 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC17.84■□□□□ 0.45
MSI1O43347 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
MSI1O43347 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
MSI1O43347 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
MSI1O43347 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC17.84■□□□□ 0.45
MSI1O43347 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC17.84■□□□□ 0.45
MSI1O43347 KRT18P58-201ENST00000527480 1120 ntBASIC17.84■□□□□ 0.45
MSI1O43347 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC17.84■□□□□ 0.45
MSI1O43347 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
MSI1O43347 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
MSI1O43347 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC17.84■□□□□ 0.45
MSI1O43347 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC17.84■□□□□ 0.45
MSI1O43347 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
MSI1O43347 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC17.84■□□□□ 0.45
MSI1O43347 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC17.84■□□□□ 0.45
MSI1O43347 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC17.84■□□□□ 0.45
MSI1O43347 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
MSI1O43347 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
MSI1O43347 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
MSI1O43347 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
MSI1O43347 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
MSI1O43347 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC17.84■□□□□ 0.45
MSI1O43347 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC17.84■□□□□ 0.45
MSI1O43347 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
MSI1O43347 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC17.84■□□□□ 0.45
MSI1O43347 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC17.83■□□□□ 0.45
MSI1O43347 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
MSI1O43347 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.45
MSI1O43347 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms