Protein–RNA interactions for Protein: O43295

SRGAP3, SLIT-ROBO Rho GTPase-activating protein 3, humanhuman

Predictions only

Length 1,099 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3O43295 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC21.33■■□□□ 1.01
SRGAP3O43295 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
SRGAP3O43295 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
SRGAP3O43295 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
SRGAP3O43295 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC21.33■■□□□ 1.01
SRGAP3O43295 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC21.33■■□□□ 1.01
SRGAP3O43295 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
SRGAP3O43295 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
SRGAP3O43295 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
SRGAP3O43295 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
SRGAP3O43295 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC21.33■■□□□ 1.01
SRGAP3O43295 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC21.33■■□□□ 1.01
SRGAP3O43295 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC21.33■■□□□ 1.01
SRGAP3O43295 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC21.33■■□□□ 1.01
SRGAP3O43295 SLC4A1APP2-201ENST00000424054 1259 ntBASIC21.33■■□□□ 1.01
SRGAP3O43295 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC21.33■■□□□ 1.01
SRGAP3O43295 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC21.33■■□□□ 1.01
SRGAP3O43295 AC004790.2-201ENST00000623588 572 ntBASIC21.33■■□□□ 1.01
SRGAP3O43295 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC21.33■■□□□ 1
SRGAP3O43295 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC21.33■■□□□ 1
SRGAP3O43295 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC21.33■■□□□ 1
SRGAP3O43295 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
SRGAP3O43295 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
SRGAP3O43295 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
SRGAP3O43295 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC21.33■■□□□ 1
SRGAP3O43295 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
SRGAP3O43295 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC21.33■■□□□ 1
SRGAP3O43295 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC21.33■■□□□ 1
SRGAP3O43295 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
SRGAP3O43295 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC21.32■■□□□ 1
SRGAP3O43295 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC21.32■■□□□ 1
SRGAP3O43295 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC21.32■■□□□ 1
SRGAP3O43295 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC21.32■■□□□ 1
SRGAP3O43295 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC21.32■■□□□ 1
SRGAP3O43295 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
SRGAP3O43295 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
SRGAP3O43295 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC21.32■■□□□ 1
SRGAP3O43295 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
SRGAP3O43295 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
SRGAP3O43295 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
SRGAP3O43295 AC012313.1-201ENST00000593393 3059 ntBASIC21.32■■□□□ 1
SRGAP3O43295 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC21.32■■□□□ 1
SRGAP3O43295 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
SRGAP3O43295 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
SRGAP3O43295 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
SRGAP3O43295 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
SRGAP3O43295 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC21.32■■□□□ 1
SRGAP3O43295 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC21.32■■□□□ 1
SRGAP3O43295 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC21.32■■□□□ 1
SRGAP3O43295 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC21.32■■□□□ 1
SRGAP3O43295 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
SRGAP3O43295 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC21.32■■□□□ 1
SRGAP3O43295 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC21.32■■□□□ 1
SRGAP3O43295 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC21.32■■□□□ 1
SRGAP3O43295 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
SRGAP3O43295 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC21.32■■□□□ 1
SRGAP3O43295 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC21.32■■□□□ 1
SRGAP3O43295 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
SRGAP3O43295 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
SRGAP3O43295 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC21.32■■□□□ 1
SRGAP3O43295 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC21.32■■□□□ 1
SRGAP3O43295 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
SRGAP3O43295 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC21.32■■□□□ 1
SRGAP3O43295 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
SRGAP3O43295 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
SRGAP3O43295 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC21.31■■□□□ 1
SRGAP3O43295 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC21.31■■□□□ 1
SRGAP3O43295 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
SRGAP3O43295 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC21.31■■□□□ 1
SRGAP3O43295 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
SRGAP3O43295 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC21.31■■□□□ 1
SRGAP3O43295 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC21.31■■□□□ 1
SRGAP3O43295 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC21.31■■□□□ 1
SRGAP3O43295 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC21.31■■□□□ 1
SRGAP3O43295 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
SRGAP3O43295 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC21.31■■□□□ 1
SRGAP3O43295 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
SRGAP3O43295 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
SRGAP3O43295 GGTLC5P-201ENST00000617623 998 ntBASIC21.31■■□□□ 1
SRGAP3O43295 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC21.31■■□□□ 1
SRGAP3O43295 ZNF259P1-201ENST00000407656 1365 ntBASIC21.31■■□□□ 1
SRGAP3O43295 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
SRGAP3O43295 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
SRGAP3O43295 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
SRGAP3O43295 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC21.31■■□□□ 1
SRGAP3O43295 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
SRGAP3O43295 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
SRGAP3O43295 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC21.31■■□□□ 1
SRGAP3O43295 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
SRGAP3O43295 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
SRGAP3O43295 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
SRGAP3O43295 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
SRGAP3O43295 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
SRGAP3O43295 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC21.3■■□□□ 1
SRGAP3O43295 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC21.3■■□□□ 1
SRGAP3O43295 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
SRGAP3O43295 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC21.3■■□□□ 1
SRGAP3O43295 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC21.3■■□□□ 1
SRGAP3O43295 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC21.3■■□□□ 1
SRGAP3O43295 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 59.9 ms