Protein–RNA interactions for Protein: O15041

SEMA3E, Semaphorin-3E, humanhuman

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3EO15041 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
SEMA3EO15041 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
SEMA3EO15041 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SEMA3EO15041 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC20.61■□□□□ 0.89
SEMA3EO15041 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SEMA3EO15041 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SEMA3EO15041 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
SEMA3EO15041 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
SEMA3EO15041 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC20.61■□□□□ 0.89
SEMA3EO15041 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC20.61■□□□□ 0.89
SEMA3EO15041 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SEMA3EO15041 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC20.61■□□□□ 0.89
SEMA3EO15041 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC20.61■□□□□ 0.89
SEMA3EO15041 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC20.61■□□□□ 0.89
SEMA3EO15041 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
SEMA3EO15041 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
SEMA3EO15041 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC20.6■□□□□ 0.89
SEMA3EO15041 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC20.6■□□□□ 0.89
SEMA3EO15041 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC20.6■□□□□ 0.89
SEMA3EO15041 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
SEMA3EO15041 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC20.6■□□□□ 0.89
SEMA3EO15041 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SEMA3EO15041 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
SEMA3EO15041 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
SEMA3EO15041 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
SEMA3EO15041 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
SEMA3EO15041 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
SEMA3EO15041 HCG4-201ENST00000418983 998 ntBASIC20.6■□□□□ 0.89
SEMA3EO15041 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC20.6■□□□□ 0.89
SEMA3EO15041 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC20.6■□□□□ 0.89
SEMA3EO15041 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
SEMA3EO15041 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC20.6■□□□□ 0.89
SEMA3EO15041 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SEMA3EO15041 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
SEMA3EO15041 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC20.6■□□□□ 0.89
SEMA3EO15041 IGHV3OR16-6-201ENST00000568775 360 ntBASIC20.6■□□□□ 0.89
SEMA3EO15041 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC20.6■□□□□ 0.89
SEMA3EO15041 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC20.6■□□□□ 0.89
SEMA3EO15041 METTL23-205ENST00000588302 925 ntTSL 5 BASIC20.6■□□□□ 0.89
SEMA3EO15041 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC20.6■□□□□ 0.89
SEMA3EO15041 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC20.6■□□□□ 0.89
SEMA3EO15041 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC20.6■□□□□ 0.89
SEMA3EO15041 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SEMA3EO15041 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
SEMA3EO15041 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
SEMA3EO15041 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
SEMA3EO15041 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC20.6■□□□□ 0.89
SEMA3EO15041 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
SEMA3EO15041 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SEMA3EO15041 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SEMA3EO15041 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
SEMA3EO15041 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SEMA3EO15041 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC20.59■□□□□ 0.89
SEMA3EO15041 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
SEMA3EO15041 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
SEMA3EO15041 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
SEMA3EO15041 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
SEMA3EO15041 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SEMA3EO15041 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC20.59■□□□□ 0.89
SEMA3EO15041 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
SEMA3EO15041 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SEMA3EO15041 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SEMA3EO15041 LBH-203ENST00000404397 543 ntTSL 4 BASIC20.59■□□□□ 0.89
SEMA3EO15041 HMGA1P7-201ENST00000406908 502 ntBASIC20.59■□□□□ 0.89
SEMA3EO15041 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
SEMA3EO15041 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC20.59■□□□□ 0.89
SEMA3EO15041 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
SEMA3EO15041 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC20.59■□□□□ 0.89
SEMA3EO15041 AC105339.1-204ENST00000636249 355 ntBASIC20.59■□□□□ 0.89
SEMA3EO15041 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC20.59■□□□□ 0.89
SEMA3EO15041 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC20.59■□□□□ 0.89
SEMA3EO15041 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
SEMA3EO15041 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC20.59■□□□□ 0.89
SEMA3EO15041 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC20.59■□□□□ 0.89
SEMA3EO15041 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
SEMA3EO15041 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
SEMA3EO15041 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
SEMA3EO15041 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
SEMA3EO15041 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
SEMA3EO15041 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
SEMA3EO15041 AC020763.4-201ENST00000623414 4170 ntBASIC20.58■□□□□ 0.89
SEMA3EO15041 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
SEMA3EO15041 KRT18P28-201ENST00000453838 1332 ntBASIC20.58■□□□□ 0.89
SEMA3EO15041 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
SEMA3EO15041 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
SEMA3EO15041 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
SEMA3EO15041 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC20.58■□□□□ 0.89
SEMA3EO15041 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC20.58■□□□□ 0.89
SEMA3EO15041 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
SEMA3EO15041 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC20.58■□□□□ 0.89
SEMA3EO15041 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC20.58■□□□□ 0.89
SEMA3EO15041 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
SEMA3EO15041 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
SEMA3EO15041 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC20.58■□□□□ 0.89
SEMA3EO15041 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC20.58■□□□□ 0.89
SEMA3EO15041 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC20.58■□□□□ 0.89
SEMA3EO15041 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
SEMA3EO15041 AC099522.2-201ENST00000607001 744 ntBASIC20.58■□□□□ 0.89
SEMA3EO15041 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC20.58■□□□□ 0.89
SEMA3EO15041 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC20.58■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 49.2 ms