Protein–RNA interactions for Protein: O00716

E2F3, Transcription factor E2F3, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
E2F3O00716 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
E2F3O00716 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC16.81■□□□□ 0.28
E2F3O00716 PMPCAP1-201ENST00000508114 1576 ntBASIC16.81■□□□□ 0.28
E2F3O00716 STX3-203ENST00000529177 1571 ntTSL 2 BASIC16.81■□□□□ 0.28
E2F3O00716 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
E2F3O00716 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC16.81■□□□□ 0.28
E2F3O00716 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
E2F3O00716 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
E2F3O00716 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
E2F3O00716 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC16.81■□□□□ 0.28
E2F3O00716 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
E2F3O00716 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
E2F3O00716 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC16.81■□□□□ 0.28
E2F3O00716 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC16.81■□□□□ 0.28
E2F3O00716 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC16.81■□□□□ 0.28
E2F3O00716 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
E2F3O00716 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
E2F3O00716 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
E2F3O00716 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC16.81■□□□□ 0.28
E2F3O00716 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC16.81■□□□□ 0.28
E2F3O00716 RCN1P2-201ENST00000398357 915 ntBASIC16.81■□□□□ 0.28
E2F3O00716 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
E2F3O00716 NKTR-203ENST00000442970 646 ntTSL 2 BASIC16.81■□□□□ 0.28
E2F3O00716 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC16.81■□□□□ 0.28
E2F3O00716 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC16.81■□□□□ 0.28
E2F3O00716 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC16.81■□□□□ 0.28
E2F3O00716 KRT18P31-201ENST00000506277 1292 ntBASIC16.81■□□□□ 0.28
E2F3O00716 FOSL1P1-201ENST00000511041 816 ntBASIC16.81■□□□□ 0.28
E2F3O00716 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
E2F3O00716 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC16.81■□□□□ 0.28
E2F3O00716 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC16.81■□□□□ 0.28
E2F3O00716 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC16.81■□□□□ 0.28
E2F3O00716 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
E2F3O00716 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC16.81■□□□□ 0.28
E2F3O00716 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
E2F3O00716 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
E2F3O00716 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
E2F3O00716 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC16.81■□□□□ 0.28
E2F3O00716 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC16.81■□□□□ 0.28
E2F3O00716 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
E2F3O00716 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
E2F3O00716 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
E2F3O00716 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
E2F3O00716 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
E2F3O00716 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
E2F3O00716 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
E2F3O00716 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
E2F3O00716 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC16.8■□□□□ 0.28
E2F3O00716 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
E2F3O00716 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
E2F3O00716 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC16.8■□□□□ 0.28
E2F3O00716 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
E2F3O00716 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
E2F3O00716 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
E2F3O00716 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC16.8■□□□□ 0.28
E2F3O00716 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
E2F3O00716 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC16.8■□□□□ 0.28
E2F3O00716 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
E2F3O00716 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
E2F3O00716 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
E2F3O00716 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
E2F3O00716 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
E2F3O00716 AL022342.1-201ENST00000400363 863 ntBASIC16.8■□□□□ 0.28
E2F3O00716 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
E2F3O00716 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC16.8■□□□□ 0.28
E2F3O00716 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
E2F3O00716 AC023511.2-201ENST00000618803 211 ntBASIC16.8■□□□□ 0.28
E2F3O00716 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC16.8■□□□□ 0.28
E2F3O00716 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
E2F3O00716 OS9-205ENST00000413095 1660 ntTSL 2 BASIC16.8■□□□□ 0.28
E2F3O00716 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC16.8■□□□□ 0.28
E2F3O00716 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
E2F3O00716 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC16.8■□□□□ 0.28
E2F3O00716 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC16.8■□□□□ 0.28
E2F3O00716 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
E2F3O00716 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC16.8■□□□□ 0.28
E2F3O00716 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC16.8■□□□□ 0.28
E2F3O00716 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
E2F3O00716 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
E2F3O00716 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
E2F3O00716 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
E2F3O00716 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC16.79■□□□□ 0.28
E2F3O00716 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
E2F3O00716 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC16.79■□□□□ 0.28
E2F3O00716 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
E2F3O00716 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC16.79■□□□□ 0.28
E2F3O00716 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
E2F3O00716 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
E2F3O00716 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
E2F3O00716 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
E2F3O00716 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC16.79■□□□□ 0.28
E2F3O00716 AL118508.1-201ENST00000613502 2345 ntBASIC16.79■□□□□ 0.28
E2F3O00716 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
E2F3O00716 CA12-203ENST00000422263 2556 ntTSL 2 BASIC16.79■□□□□ 0.28
E2F3O00716 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
E2F3O00716 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC16.79■□□□□ 0.28
E2F3O00716 AC106795.1-205ENST00000512851 1056 ntBASIC16.79■□□□□ 0.28
E2F3O00716 AP002469.2-201ENST00000531724 424 ntBASIC16.79■□□□□ 0.28
E2F3O00716 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC16.79■□□□□ 0.28
E2F3O00716 SLC25A6P4-201ENST00000586535 553 ntBASIC16.79■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms