Protein–RNA interactions for Protein: H3BT56

CHKB-CPT1B, CHKB-CPT1B readthrough (NMD candidate) (Fragment), humanhuman

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1BH3BT56 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC9.55□□□□□ -0.88
CHKB-CPT1BH3BT56 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
CHKB-CPT1BH3BT56 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC9.55□□□□□ -0.88
CHKB-CPT1BH3BT56 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
CHKB-CPT1BH3BT56 CICP20-201ENST00000443330 2801 ntBASIC9.55□□□□□ -0.88
CHKB-CPT1BH3BT56 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
CHKB-CPT1BH3BT56 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
CHKB-CPT1BH3BT56 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC9.55□□□□□ -0.88
CHKB-CPT1BH3BT56 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC9.55□□□□□ -0.88
CHKB-CPT1BH3BT56 RNF146-205ENST00000477776 762 ntTSL 3 BASIC9.55□□□□□ -0.88
CHKB-CPT1BH3BT56 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC9.55□□□□□ -0.88
CHKB-CPT1BH3BT56 MIR4787-201ENST00000607364 84 ntBASIC9.55□□□□□ -0.88
CHKB-CPT1BH3BT56 BRD4-212ENST00000630599 726 ntTSL 2 BASIC9.55□□□□□ -0.88
CHKB-CPT1BH3BT56 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
CHKB-CPT1BH3BT56 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC9.55□□□□□ -0.88
CHKB-CPT1BH3BT56 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC9.55□□□□□ -0.88
CHKB-CPT1BH3BT56 WIZ-202ENST00000389282 4067 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
CHKB-CPT1BH3BT56 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC9.55□□□□□ -0.88
CHKB-CPT1BH3BT56 PANX2-202ENST00000395842 3051 ntAPPRIS P1 TSL 2 BASIC9.55□□□□□ -0.88
CHKB-CPT1BH3BT56 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
CHKB-CPT1BH3BT56 VWC2-201ENST00000340652 11299 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
CHKB-CPT1BH3BT56 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
CHKB-CPT1BH3BT56 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
CHKB-CPT1BH3BT56 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
CHKB-CPT1BH3BT56 SP3-201ENST00000310015 6359 ntAPPRIS P3 TSL 1 (best) BASIC9.55□□□□□ -0.88
CHKB-CPT1BH3BT56 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC9.55□□□□□ -0.88
CHKB-CPT1BH3BT56 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
CHKB-CPT1BH3BT56 SMARCA4-204ENST00000444061 4938 ntAPPRIS ALT1 TSL 5 BASIC9.55□□□□□ -0.88
CHKB-CPT1BH3BT56 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
CHKB-CPT1BH3BT56 PRICKLE1-203ENST00000455697 4277 ntAPPRIS P1 TSL 5 BASIC9.55□□□□□ -0.88
CHKB-CPT1BH3BT56 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC9.55□□□□□ -0.88
CHKB-CPT1BH3BT56 LONP1-202ENST00000540670 3002 ntTSL 2 BASIC9.55□□□□□ -0.88
CHKB-CPT1BH3BT56 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
CHKB-CPT1BH3BT56 GMPS-203ENST00000496455 8751 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
CHKB-CPT1BH3BT56 PREX1-201ENST00000371941 6636 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
CHKB-CPT1BH3BT56 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
CHKB-CPT1BH3BT56 CABIN1-201ENST00000263119 7222 ntAPPRIS P3 TSL 1 (best) BASIC9.55□□□□□ -0.88
CHKB-CPT1BH3BT56 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
CHKB-CPT1BH3BT56 PASK-203ENST00000403638 5161 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
CHKB-CPT1BH3BT56 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC9.54□□□□□ -0.88
CHKB-CPT1BH3BT56 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
CHKB-CPT1BH3BT56 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC9.54□□□□□ -0.88
CHKB-CPT1BH3BT56 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
CHKB-CPT1BH3BT56 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC9.54□□□□□ -0.88
CHKB-CPT1BH3BT56 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC9.54□□□□□ -0.88
CHKB-CPT1BH3BT56 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC9.54□□□□□ -0.88
CHKB-CPT1BH3BT56 PIGG-202ENST00000383028 2787 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
CHKB-CPT1BH3BT56 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC9.54□□□□□ -0.88
CHKB-CPT1BH3BT56 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC9.54□□□□□ -0.88
CHKB-CPT1BH3BT56 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC9.54□□□□□ -0.88
CHKB-CPT1BH3BT56 SHANK2-201ENST00000338508 7271 ntTSL 5 BASIC9.54□□□□□ -0.88
CHKB-CPT1BH3BT56 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
CHKB-CPT1BH3BT56 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC9.54□□□□□ -0.88
CHKB-CPT1BH3BT56 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC9.54□□□□□ -0.88
CHKB-CPT1BH3BT56 SEZ6-201ENST00000317338 4471 ntAPPRIS P4 TSL 1 (best) BASIC9.54□□□□□ -0.88
CHKB-CPT1BH3BT56 RRBP1-201ENST00000246043 4737 ntAPPRIS ALT2 TSL 1 (best) BASIC9.54□□□□□ -0.88
CHKB-CPT1BH3BT56 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC9.54□□□□□ -0.88
CHKB-CPT1BH3BT56 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
CHKB-CPT1BH3BT56 ZNF664-202ENST00000392404 4262 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
CHKB-CPT1BH3BT56 EIF4G1-205ENST00000382330 5129 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
CHKB-CPT1BH3BT56 VDR-201ENST00000229022 4773 ntAPPRIS P1 TSL 5 BASIC9.54□□□□□ -0.88
CHKB-CPT1BH3BT56 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
CHKB-CPT1BH3BT56 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
CHKB-CPT1BH3BT56 ATP5G2P3-201ENST00000429083 425 ntBASIC9.54□□□□□ -0.88
CHKB-CPT1BH3BT56 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC9.54□□□□□ -0.88
CHKB-CPT1BH3BT56 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC9.54□□□□□ -0.88
CHKB-CPT1BH3BT56 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC9.54□□□□□ -0.88
CHKB-CPT1BH3BT56 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
CHKB-CPT1BH3BT56 DUX4L19-201ENST00000557448 1267 ntBASIC9.54□□□□□ -0.88
CHKB-CPT1BH3BT56 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC9.54□□□□□ -0.88
CHKB-CPT1BH3BT56 EPAS1-201ENST00000263734 5166 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
CHKB-CPT1BH3BT56 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC9.54□□□□□ -0.88
CHKB-CPT1BH3BT56 ARHGAP20-202ENST00000524756 6180 ntAPPRIS ALT2 TSL 1 (best) BASIC9.54□□□□□ -0.88
CHKB-CPT1BH3BT56 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC9.54□□□□□ -0.88
CHKB-CPT1BH3BT56 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC9.54□□□□□ -0.88
CHKB-CPT1BH3BT56 KDM7A-201ENST00000397560 9272 ntAPPRIS P1 TSL 2 BASIC9.54□□□□□ -0.88
CHKB-CPT1BH3BT56 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC9.54□□□□□ -0.88
CHKB-CPT1BH3BT56 AC005252.3-201ENST00000623855 2258 ntBASIC9.54□□□□□ -0.88
CHKB-CPT1BH3BT56 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC9.54□□□□□ -0.88
CHKB-CPT1BH3BT56 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
CHKB-CPT1BH3BT56 PDXK-201ENST00000291565 7366 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
CHKB-CPT1BH3BT56 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC9.54□□□□□ -0.88
CHKB-CPT1BH3BT56 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC9.54□□□□□ -0.88
CHKB-CPT1BH3BT56 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC9.54□□□□□ -0.88
CHKB-CPT1BH3BT56 ETNK1-201ENST00000266517 7159 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
CHKB-CPT1BH3BT56 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC9.54□□□□□ -0.88
CHKB-CPT1BH3BT56 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC9.54□□□□□ -0.88
CHKB-CPT1BH3BT56 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
CHKB-CPT1BH3BT56 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
CHKB-CPT1BH3BT56 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC9.54□□□□□ -0.88
CHKB-CPT1BH3BT56 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
CHKB-CPT1BH3BT56 AC080128.2-201ENST00000641520 11863 ntBASIC9.54□□□□□ -0.88
CHKB-CPT1BH3BT56 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
CHKB-CPT1BH3BT56 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
CHKB-CPT1BH3BT56 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC9.54□□□□□ -0.88
CHKB-CPT1BH3BT56 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC9.54□□□□□ -0.88
CHKB-CPT1BH3BT56 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC9.54□□□□□ -0.88
CHKB-CPT1BH3BT56 GRK6P1-201ENST00000400595 1711 ntBASIC9.53□□□□□ -0.88
CHKB-CPT1BH3BT56 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
CHKB-CPT1BH3BT56 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC9.53□□□□□ -0.88
Retrieved 100 of 98,524 protein–RNA pairs in 62 ms