Protein–RNA interactions for Protein: B2RNG4

TRIM6-TRIM34, TRIM6-TRIM34 readthrough, humanhuman

Predictions only

Length 842 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM6-TRIM34B2RNG4 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
TRIM6-TRIM34B2RNG4 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC21.09■□□□□ 0.97
TRIM6-TRIM34B2RNG4 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
TRIM6-TRIM34B2RNG4 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
TRIM6-TRIM34B2RNG4 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
TRIM6-TRIM34B2RNG4 AC079776.2-201ENST00000641154 1609 ntBASIC21.09■□□□□ 0.97
TRIM6-TRIM34B2RNG4 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
TRIM6-TRIM34B2RNG4 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
TRIM6-TRIM34B2RNG4 DFFB-203ENST00000341385 572 ntTSL 5 BASIC21.09■□□□□ 0.97
TRIM6-TRIM34B2RNG4 EMD-201ENST00000369835 966 ntTSL 3 BASIC21.09■□□□□ 0.97
TRIM6-TRIM34B2RNG4 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC21.09■□□□□ 0.97
TRIM6-TRIM34B2RNG4 TLE1-202ENST00000376484 666 ntTSL 3 BASIC21.09■□□□□ 0.97
TRIM6-TRIM34B2RNG4 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC21.09■□□□□ 0.97
TRIM6-TRIM34B2RNG4 TSPY19P-201ENST00000418461 509 ntBASIC21.09■□□□□ 0.97
TRIM6-TRIM34B2RNG4 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC21.09■□□□□ 0.97
TRIM6-TRIM34B2RNG4 TSPY18P-201ENST00000441642 509 ntBASIC21.09■□□□□ 0.97
TRIM6-TRIM34B2RNG4 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
TRIM6-TRIM34B2RNG4 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC21.09■□□□□ 0.97
TRIM6-TRIM34B2RNG4 TPM1-218ENST00000559281 851 ntTSL 5 BASIC21.09■□□□□ 0.97
TRIM6-TRIM34B2RNG4 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
TRIM6-TRIM34B2RNG4 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
TRIM6-TRIM34B2RNG4 CLEC4GP1-201ENST00000596555 870 ntBASIC21.09■□□□□ 0.97
TRIM6-TRIM34B2RNG4 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
TRIM6-TRIM34B2RNG4 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC21.09■□□□□ 0.97
TRIM6-TRIM34B2RNG4 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC21.09■□□□□ 0.97
TRIM6-TRIM34B2RNG4 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
TRIM6-TRIM34B2RNG4 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC21.09■□□□□ 0.97
TRIM6-TRIM34B2RNG4 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
TRIM6-TRIM34B2RNG4 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
TRIM6-TRIM34B2RNG4 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
TRIM6-TRIM34B2RNG4 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
TRIM6-TRIM34B2RNG4 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
TRIM6-TRIM34B2RNG4 AC009053.2-201ENST00000563701 2365 ntBASIC21.09■□□□□ 0.97
TRIM6-TRIM34B2RNG4 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC21.09■□□□□ 0.97
TRIM6-TRIM34B2RNG4 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
TRIM6-TRIM34B2RNG4 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
TRIM6-TRIM34B2RNG4 PRORSD1P-202ENST00000563365 2154 ntBASIC21.09■□□□□ 0.97
TRIM6-TRIM34B2RNG4 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
TRIM6-TRIM34B2RNG4 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
TRIM6-TRIM34B2RNG4 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC21.08■□□□□ 0.97
TRIM6-TRIM34B2RNG4 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC21.08■□□□□ 0.97
TRIM6-TRIM34B2RNG4 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC21.08■□□□□ 0.97
TRIM6-TRIM34B2RNG4 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
TRIM6-TRIM34B2RNG4 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
TRIM6-TRIM34B2RNG4 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
TRIM6-TRIM34B2RNG4 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
TRIM6-TRIM34B2RNG4 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
TRIM6-TRIM34B2RNG4 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
TRIM6-TRIM34B2RNG4 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
TRIM6-TRIM34B2RNG4 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC21.08■□□□□ 0.97
TRIM6-TRIM34B2RNG4 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC21.08■□□□□ 0.97
TRIM6-TRIM34B2RNG4 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC21.08■□□□□ 0.97
TRIM6-TRIM34B2RNG4 BX005266.1-201ENST00000473402 457 ntBASIC21.08■□□□□ 0.97
TRIM6-TRIM34B2RNG4 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC21.08■□□□□ 0.97
TRIM6-TRIM34B2RNG4 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC21.08■□□□□ 0.97
TRIM6-TRIM34B2RNG4 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.97
TRIM6-TRIM34B2RNG4 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.97
TRIM6-TRIM34B2RNG4 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC21.08■□□□□ 0.97
TRIM6-TRIM34B2RNG4 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
TRIM6-TRIM34B2RNG4 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC21.08■□□□□ 0.96
TRIM6-TRIM34B2RNG4 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
TRIM6-TRIM34B2RNG4 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.96
TRIM6-TRIM34B2RNG4 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC21.08■□□□□ 0.96
TRIM6-TRIM34B2RNG4 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
TRIM6-TRIM34B2RNG4 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC21.08■□□□□ 0.96
TRIM6-TRIM34B2RNG4 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC21.08■□□□□ 0.96
TRIM6-TRIM34B2RNG4 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.96
TRIM6-TRIM34B2RNG4 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
TRIM6-TRIM34B2RNG4 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
TRIM6-TRIM34B2RNG4 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC21.07■□□□□ 0.96
TRIM6-TRIM34B2RNG4 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
TRIM6-TRIM34B2RNG4 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
TRIM6-TRIM34B2RNG4 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
TRIM6-TRIM34B2RNG4 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
TRIM6-TRIM34B2RNG4 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
TRIM6-TRIM34B2RNG4 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC21.07■□□□□ 0.96
TRIM6-TRIM34B2RNG4 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC21.07■□□□□ 0.96
TRIM6-TRIM34B2RNG4 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
TRIM6-TRIM34B2RNG4 AC097637.2-201ENST00000624096 1997 ntBASIC21.07■□□□□ 0.96
TRIM6-TRIM34B2RNG4 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
TRIM6-TRIM34B2RNG4 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC21.07■□□□□ 0.96
TRIM6-TRIM34B2RNG4 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
TRIM6-TRIM34B2RNG4 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
TRIM6-TRIM34B2RNG4 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC21.07■□□□□ 0.96
TRIM6-TRIM34B2RNG4 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC21.07■□□□□ 0.96
TRIM6-TRIM34B2RNG4 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC21.07■□□□□ 0.96
TRIM6-TRIM34B2RNG4 CYB561-217ENST00000582997 877 ntTSL 5 BASIC21.07■□□□□ 0.96
TRIM6-TRIM34B2RNG4 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
TRIM6-TRIM34B2RNG4 MTDHP3-201ENST00000594186 672 ntBASIC21.07■□□□□ 0.96
TRIM6-TRIM34B2RNG4 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC21.07■□□□□ 0.96
TRIM6-TRIM34B2RNG4 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC21.07■□□□□ 0.96
TRIM6-TRIM34B2RNG4 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
TRIM6-TRIM34B2RNG4 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
TRIM6-TRIM34B2RNG4 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC21.07■□□□□ 0.96
TRIM6-TRIM34B2RNG4 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
TRIM6-TRIM34B2RNG4 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC21.06■□□□□ 0.96
TRIM6-TRIM34B2RNG4 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC21.06■□□□□ 0.96
TRIM6-TRIM34B2RNG4 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
TRIM6-TRIM34B2RNG4 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
TRIM6-TRIM34B2RNG4 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 42.5 ms