Protein–RNA interactions for Protein: A6NFA1

TRABD2B, Metalloprotease TIKI2, humanhuman

Predictions only

Length 517 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRABD2BA6NFA1 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TRABD2BA6NFA1 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TRABD2BA6NFA1 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
TRABD2BA6NFA1 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TRABD2BA6NFA1 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TRABD2BA6NFA1 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
TRABD2BA6NFA1 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC16.55■□□□□ 0.24
TRABD2BA6NFA1 ABALON-201ENST00000629058 1903 ntBASIC16.55■□□□□ 0.24
TRABD2BA6NFA1 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
TRABD2BA6NFA1 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC16.54■□□□□ 0.24
TRABD2BA6NFA1 CD276-201ENST00000318424 2738 ntTSL 5 BASIC16.54■□□□□ 0.24
TRABD2BA6NFA1 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
TRABD2BA6NFA1 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TRABD2BA6NFA1 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC16.54■□□□□ 0.24
TRABD2BA6NFA1 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
TRABD2BA6NFA1 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TRABD2BA6NFA1 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TRABD2BA6NFA1 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TRABD2BA6NFA1 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
TRABD2BA6NFA1 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC16.54■□□□□ 0.24
TRABD2BA6NFA1 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TRABD2BA6NFA1 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
TRABD2BA6NFA1 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC16.54■□□□□ 0.24
TRABD2BA6NFA1 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC16.54■□□□□ 0.24
TRABD2BA6NFA1 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
TRABD2BA6NFA1 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC16.54■□□□□ 0.24
TRABD2BA6NFA1 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TRABD2BA6NFA1 AL627223.1-201ENST00000416693 442 ntBASIC16.54■□□□□ 0.24
TRABD2BA6NFA1 HNRNPA1P40-201ENST00000426371 1278 ntBASIC16.54■□□□□ 0.24
TRABD2BA6NFA1 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
TRABD2BA6NFA1 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC16.54■□□□□ 0.24
TRABD2BA6NFA1 AC112191.1-201ENST00000523689 701 ntBASIC16.54■□□□□ 0.24
TRABD2BA6NFA1 VPS29-207ENST00000549970 818 ntTSL 3 BASIC16.54■□□□□ 0.24
TRABD2BA6NFA1 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC16.54■□□□□ 0.24
TRABD2BA6NFA1 AC009093.7-201ENST00000623853 1223 ntBASIC16.54■□□□□ 0.24
TRABD2BA6NFA1 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
TRABD2BA6NFA1 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TRABD2BA6NFA1 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
TRABD2BA6NFA1 AC006116.8-202ENST00000587620 1550 ntBASIC16.54■□□□□ 0.24
TRABD2BA6NFA1 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TRABD2BA6NFA1 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
TRABD2BA6NFA1 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC16.54■□□□□ 0.24
TRABD2BA6NFA1 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TRABD2BA6NFA1 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC16.54■□□□□ 0.24
TRABD2BA6NFA1 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TRABD2BA6NFA1 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
TRABD2BA6NFA1 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
TRABD2BA6NFA1 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC16.53■□□□□ 0.24
TRABD2BA6NFA1 PI4KAP1-204ENST00000612579 1703 ntBASIC16.53■□□□□ 0.24
TRABD2BA6NFA1 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TRABD2BA6NFA1 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TRABD2BA6NFA1 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
TRABD2BA6NFA1 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC16.53■□□□□ 0.24
TRABD2BA6NFA1 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
TRABD2BA6NFA1 AC092919.2-201ENST00000623631 1645 ntBASIC16.53■□□□□ 0.24
TRABD2BA6NFA1 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
TRABD2BA6NFA1 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TRABD2BA6NFA1 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TRABD2BA6NFA1 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
TRABD2BA6NFA1 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TRABD2BA6NFA1 CD276-203ENST00000537340 2439 ntTSL 2 BASIC16.53■□□□□ 0.24
TRABD2BA6NFA1 TFAMP1-201ENST00000412727 736 ntBASIC16.53■□□□□ 0.24
TRABD2BA6NFA1 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC16.53■□□□□ 0.24
TRABD2BA6NFA1 GAPDHP21-201ENST00000450301 1010 ntBASIC16.53■□□□□ 0.24
TRABD2BA6NFA1 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC16.53■□□□□ 0.24
TRABD2BA6NFA1 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC16.53■□□□□ 0.24
TRABD2BA6NFA1 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC16.53■□□□□ 0.24
TRABD2BA6NFA1 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC16.53■□□□□ 0.24
TRABD2BA6NFA1 IGHV3OR16-6-201ENST00000568775 360 ntBASIC16.53■□□□□ 0.24
TRABD2BA6NFA1 NAA60-208ENST00000570819 833 ntTSL 2 BASIC16.53■□□□□ 0.24
TRABD2BA6NFA1 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC16.53■□□□□ 0.24
TRABD2BA6NFA1 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC16.53■□□□□ 0.24
TRABD2BA6NFA1 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TRABD2BA6NFA1 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TRABD2BA6NFA1 AC073592.3-201ENST00000625118 1834 ntBASIC16.53■□□□□ 0.24
TRABD2BA6NFA1 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
TRABD2BA6NFA1 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
TRABD2BA6NFA1 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TRABD2BA6NFA1 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
TRABD2BA6NFA1 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TRABD2BA6NFA1 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TRABD2BA6NFA1 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
TRABD2BA6NFA1 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
TRABD2BA6NFA1 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
TRABD2BA6NFA1 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC16.53■□□□□ 0.24
TRABD2BA6NFA1 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC16.52■□□□□ 0.24
TRABD2BA6NFA1 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
TRABD2BA6NFA1 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
TRABD2BA6NFA1 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC16.52■□□□□ 0.24
TRABD2BA6NFA1 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC16.52■□□□□ 0.24
TRABD2BA6NFA1 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC16.52■□□□□ 0.24
TRABD2BA6NFA1 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
TRABD2BA6NFA1 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
TRABD2BA6NFA1 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
TRABD2BA6NFA1 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
TRABD2BA6NFA1 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
TRABD2BA6NFA1 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
TRABD2BA6NFA1 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC16.52■□□□□ 0.24
TRABD2BA6NFA1 AC005237.2-201ENST00000434368 219 ntBASIC16.52■□□□□ 0.24
TRABD2BA6NFA1 CCDC74BP1-201ENST00000508880 1123 ntBASIC16.52■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 75.5 ms