Protein–RNA interactions for Protein: A0A576

TCRBV9S1A1T, T-cell receptor beta variable 3-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV9S1A1TA0A576 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TCRBV9S1A1TA0A576 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
TCRBV9S1A1TA0A576 AC211429.1-201ENST00000415277 523 ntBASIC17.35■□□□□ 0.37
TCRBV9S1A1TA0A576 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC17.35■□□□□ 0.37
TCRBV9S1A1TA0A576 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
TCRBV9S1A1TA0A576 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC17.35■□□□□ 0.37
TCRBV9S1A1TA0A576 PPOX-219ENST00000544598 813 ntTSL 2 BASIC17.35■□□□□ 0.37
TCRBV9S1A1TA0A576 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC17.35■□□□□ 0.37
TCRBV9S1A1TA0A576 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC17.35■□□□□ 0.37
TCRBV9S1A1TA0A576 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC17.35■□□□□ 0.37
TCRBV9S1A1TA0A576 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TCRBV9S1A1TA0A576 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC17.35■□□□□ 0.37
TCRBV9S1A1TA0A576 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
TCRBV9S1A1TA0A576 GPR89P-201ENST00000407924 1495 ntBASIC17.35■□□□□ 0.37
TCRBV9S1A1TA0A576 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TCRBV9S1A1TA0A576 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
TCRBV9S1A1TA0A576 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
TCRBV9S1A1TA0A576 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
TCRBV9S1A1TA0A576 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
TCRBV9S1A1TA0A576 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
TCRBV9S1A1TA0A576 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
TCRBV9S1A1TA0A576 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
TCRBV9S1A1TA0A576 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
TCRBV9S1A1TA0A576 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC17.34■□□□□ 0.37
TCRBV9S1A1TA0A576 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
TCRBV9S1A1TA0A576 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TCRBV9S1A1TA0A576 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TCRBV9S1A1TA0A576 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TCRBV9S1A1TA0A576 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC17.34■□□□□ 0.37
TCRBV9S1A1TA0A576 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
TCRBV9S1A1TA0A576 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
TCRBV9S1A1TA0A576 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
TCRBV9S1A1TA0A576 AC246785.2-201ENST00000432512 513 ntBASIC17.34■□□□□ 0.37
TCRBV9S1A1TA0A576 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC17.34■□□□□ 0.37
TCRBV9S1A1TA0A576 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC17.34■□□□□ 0.37
TCRBV9S1A1TA0A576 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
TCRBV9S1A1TA0A576 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
TCRBV9S1A1TA0A576 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TCRBV9S1A1TA0A576 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TCRBV9S1A1TA0A576 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC17.34■□□□□ 0.37
TCRBV9S1A1TA0A576 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC17.34■□□□□ 0.37
TCRBV9S1A1TA0A576 AL662844.4-201ENST00000606367 2838 ntBASIC17.34■□□□□ 0.37
TCRBV9S1A1TA0A576 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TCRBV9S1A1TA0A576 NDUFV2-AS1-203ENST00000608008 779 ntBASIC17.34■□□□□ 0.37
TCRBV9S1A1TA0A576 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
TCRBV9S1A1TA0A576 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC17.34■□□□□ 0.37
TCRBV9S1A1TA0A576 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
TCRBV9S1A1TA0A576 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC17.34■□□□□ 0.37
TCRBV9S1A1TA0A576 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC17.33■□□□□ 0.37
TCRBV9S1A1TA0A576 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
TCRBV9S1A1TA0A576 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC17.33■□□□□ 0.37
TCRBV9S1A1TA0A576 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC17.33■□□□□ 0.37
TCRBV9S1A1TA0A576 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
TCRBV9S1A1TA0A576 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
TCRBV9S1A1TA0A576 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.37
TCRBV9S1A1TA0A576 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
TCRBV9S1A1TA0A576 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
TCRBV9S1A1TA0A576 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC17.33■□□□□ 0.37
TCRBV9S1A1TA0A576 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC17.33■□□□□ 0.36
TCRBV9S1A1TA0A576 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TCRBV9S1A1TA0A576 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TCRBV9S1A1TA0A576 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
TCRBV9S1A1TA0A576 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TCRBV9S1A1TA0A576 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TCRBV9S1A1TA0A576 AC003669.1-201ENST00000334569 611 ntBASIC17.33■□□□□ 0.36
TCRBV9S1A1TA0A576 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC17.33■□□□□ 0.36
TCRBV9S1A1TA0A576 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC17.33■□□□□ 0.36
TCRBV9S1A1TA0A576 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC17.33■□□□□ 0.36
TCRBV9S1A1TA0A576 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC17.33■□□□□ 0.36
TCRBV9S1A1TA0A576 AC091607.1-201ENST00000490318 1060 ntBASIC17.33■□□□□ 0.36
TCRBV9S1A1TA0A576 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC17.33■□□□□ 0.36
TCRBV9S1A1TA0A576 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
TCRBV9S1A1TA0A576 KRT8P26-201ENST00000534154 1276 ntBASIC17.33■□□□□ 0.36
TCRBV9S1A1TA0A576 LTBR-211ENST00000543190 785 ntTSL 3 BASIC17.33■□□□□ 0.36
TCRBV9S1A1TA0A576 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC17.33■□□□□ 0.36
TCRBV9S1A1TA0A576 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC17.33■□□□□ 0.36
TCRBV9S1A1TA0A576 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
TCRBV9S1A1TA0A576 AD001527.2-201ENST00000622994 785 ntBASIC17.33■□□□□ 0.36
TCRBV9S1A1TA0A576 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
TCRBV9S1A1TA0A576 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC17.33■□□□□ 0.36
TCRBV9S1A1TA0A576 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TCRBV9S1A1TA0A576 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
TCRBV9S1A1TA0A576 OR6D1P-203ENST00000641209 4860 ntBASIC17.33■□□□□ 0.36
TCRBV9S1A1TA0A576 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
TCRBV9S1A1TA0A576 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
TCRBV9S1A1TA0A576 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.36
TCRBV9S1A1TA0A576 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC17.32■□□□□ 0.36
TCRBV9S1A1TA0A576 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
TCRBV9S1A1TA0A576 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TCRBV9S1A1TA0A576 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TCRBV9S1A1TA0A576 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
TCRBV9S1A1TA0A576 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
TCRBV9S1A1TA0A576 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
TCRBV9S1A1TA0A576 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC17.32■□□□□ 0.36
TCRBV9S1A1TA0A576 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC17.32■□□□□ 0.36
TCRBV9S1A1TA0A576 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC17.32■□□□□ 0.36
TCRBV9S1A1TA0A576 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC17.32■□□□□ 0.36
TCRBV9S1A1TA0A576 DAP-202ENST00000432074 1048 ntTSL 2 BASIC17.32■□□□□ 0.36
TCRBV9S1A1TA0A576 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC17.32■□□□□ 0.36
TCRBV9S1A1TA0A576 AC009533.2-201ENST00000543664 586 ntBASIC17.32■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms