Protein–RNA interactions for Protein: Q9Y5F9

PCDHGB6, Protocadherin gamma-B6, humanhuman

Predictions only

Length 930 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB6Q9Y5F9 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC22.69■■□□□ 1.22
PCDHGB6Q9Y5F9 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC22.69■■□□□ 1.22
PCDHGB6Q9Y5F9 AC009831.1-201ENST00000580420 1582 ntBASIC22.69■■□□□ 1.22
PCDHGB6Q9Y5F9 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
PCDHGB6Q9Y5F9 HES4-204ENST00000484667 667 ntTSL 3 BASIC22.69■■□□□ 1.22
PCDHGB6Q9Y5F9 PFN2-211ENST00000489155 636 ntTSL 4 BASIC22.69■■□□□ 1.22
PCDHGB6Q9Y5F9 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC22.68■■□□□ 1.22
PCDHGB6Q9Y5F9 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC22.68■■□□□ 1.22
PCDHGB6Q9Y5F9 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC22.68■■□□□ 1.22
PCDHGB6Q9Y5F9 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC22.68■■□□□ 1.22
PCDHGB6Q9Y5F9 RP9P-202ENST00000450133 1212 ntBASIC22.68■■□□□ 1.22
PCDHGB6Q9Y5F9 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC22.68■■□□□ 1.22
PCDHGB6Q9Y5F9 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC22.68■■□□□ 1.22
PCDHGB6Q9Y5F9 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC22.67■■□□□ 1.22
PCDHGB6Q9Y5F9 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
PCDHGB6Q9Y5F9 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC22.67■■□□□ 1.22
PCDHGB6Q9Y5F9 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC22.67■■□□□ 1.22
PCDHGB6Q9Y5F9 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
PCDHGB6Q9Y5F9 AC026202.3-201ENST00000600805 1127 ntBASIC22.67■■□□□ 1.22
PCDHGB6Q9Y5F9 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
PCDHGB6Q9Y5F9 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
PCDHGB6Q9Y5F9 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
PCDHGB6Q9Y5F9 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC22.66■■□□□ 1.22
PCDHGB6Q9Y5F9 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
PCDHGB6Q9Y5F9 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC22.66■■□□□ 1.22
PCDHGB6Q9Y5F9 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC22.66■■□□□ 1.22
PCDHGB6Q9Y5F9 AC129492.7-201ENST00000622992 756 ntBASIC22.66■■□□□ 1.22
PCDHGB6Q9Y5F9 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC22.65■■□□□ 1.22
PCDHGB6Q9Y5F9 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
PCDHGB6Q9Y5F9 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC22.65■■□□□ 1.22
PCDHGB6Q9Y5F9 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
PCDHGB6Q9Y5F9 AL592293.1-201ENST00000502889 1188 ntBASIC22.65■■□□□ 1.22
PCDHGB6Q9Y5F9 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC22.65■■□□□ 1.22
PCDHGB6Q9Y5F9 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
PCDHGB6Q9Y5F9 MIR3960-201ENST00000583311 91 ntBASIC22.65■■□□□ 1.22
PCDHGB6Q9Y5F9 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
PCDHGB6Q9Y5F9 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC22.65■■□□□ 1.22
PCDHGB6Q9Y5F9 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC22.64■■□□□ 1.22
PCDHGB6Q9Y5F9 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
PCDHGB6Q9Y5F9 GUK1-208ENST00000366728 842 ntTSL 2 BASIC22.64■■□□□ 1.21
PCDHGB6Q9Y5F9 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
PCDHGB6Q9Y5F9 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC22.64■■□□□ 1.21
PCDHGB6Q9Y5F9 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC22.64■■□□□ 1.21
PCDHGB6Q9Y5F9 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC22.64■■□□□ 1.21
PCDHGB6Q9Y5F9 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
PCDHGB6Q9Y5F9 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC22.63■■□□□ 1.21
PCDHGB6Q9Y5F9 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
PCDHGB6Q9Y5F9 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC22.63■■□□□ 1.21
PCDHGB6Q9Y5F9 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
PCDHGB6Q9Y5F9 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
PCDHGB6Q9Y5F9 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
PCDHGB6Q9Y5F9 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC22.63■■□□□ 1.21
PCDHGB6Q9Y5F9 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
PCDHGB6Q9Y5F9 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC22.62■■□□□ 1.21
PCDHGB6Q9Y5F9 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC22.62■■□□□ 1.21
PCDHGB6Q9Y5F9 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC22.62■■□□□ 1.21
PCDHGB6Q9Y5F9 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
PCDHGB6Q9Y5F9 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
PCDHGB6Q9Y5F9 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC22.62■■□□□ 1.21
PCDHGB6Q9Y5F9 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC22.62■■□□□ 1.21
PCDHGB6Q9Y5F9 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
PCDHGB6Q9Y5F9 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC22.62■■□□□ 1.21
PCDHGB6Q9Y5F9 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
PCDHGB6Q9Y5F9 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC22.62■■□□□ 1.21
PCDHGB6Q9Y5F9 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC22.61■■□□□ 1.21
PCDHGB6Q9Y5F9 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC22.61■■□□□ 1.21
PCDHGB6Q9Y5F9 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC22.6■■□□□ 1.21
PCDHGB6Q9Y5F9 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
PCDHGB6Q9Y5F9 AC093536.1-201ENST00000569153 554 ntBASIC22.6■■□□□ 1.21
PCDHGB6Q9Y5F9 RAP2CP1-202ENST00000605179 643 ntBASIC22.6■■□□□ 1.21
PCDHGB6Q9Y5F9 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
PCDHGB6Q9Y5F9 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC22.6■■□□□ 1.21
PCDHGB6Q9Y5F9 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC22.59■■□□□ 1.21
PCDHGB6Q9Y5F9 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
PCDHGB6Q9Y5F9 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
PCDHGB6Q9Y5F9 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC22.59■■□□□ 1.21
PCDHGB6Q9Y5F9 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC22.58■■□□□ 1.21
PCDHGB6Q9Y5F9 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC22.58■■□□□ 1.21
PCDHGB6Q9Y5F9 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
PCDHGB6Q9Y5F9 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
PCDHGB6Q9Y5F9 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC22.57■■□□□ 1.2
PCDHGB6Q9Y5F9 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
PCDHGB6Q9Y5F9 AC020928.2-201ENST00000588717 2197 ntBASIC22.56■■□□□ 1.2
PCDHGB6Q9Y5F9 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC22.56■■□□□ 1.2
PCDHGB6Q9Y5F9 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC22.56■■□□□ 1.2
PCDHGB6Q9Y5F9 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC22.56■■□□□ 1.2
PCDHGB6Q9Y5F9 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC22.56■■□□□ 1.2
PCDHGB6Q9Y5F9 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC22.56■■□□□ 1.2
PCDHGB6Q9Y5F9 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC22.55■■□□□ 1.2
PCDHGB6Q9Y5F9 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC22.55■■□□□ 1.2
PCDHGB6Q9Y5F9 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC22.55■■□□□ 1.2
PCDHGB6Q9Y5F9 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC22.55■■□□□ 1.2
PCDHGB6Q9Y5F9 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC22.55■■□□□ 1.2
PCDHGB6Q9Y5F9 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC22.55■■□□□ 1.2
PCDHGB6Q9Y5F9 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC22.55■■□□□ 1.2
PCDHGB6Q9Y5F9 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC22.55■■□□□ 1.2
PCDHGB6Q9Y5F9 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC22.55■■□□□ 1.2
PCDHGB6Q9Y5F9 AC091060.1-201ENST00000623524 1766 ntBASIC22.55■■□□□ 1.2
PCDHGB6Q9Y5F9 AC093323.1-202ENST00000635031 2045 ntBASIC22.55■■□□□ 1.2
PCDHGB6Q9Y5F9 LTK-203ENST00000453182 2412 ntTSL 2 BASIC22.55■■□□□ 1.2
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms