Protein–RNA interactions for Protein: Q9Y5F2

PCDHB11, Protocadherin beta-11, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11Q9Y5F2 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC23.67■■□□□ 1.38
PCDHB11Q9Y5F2 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC23.67■■□□□ 1.38
PCDHB11Q9Y5F2 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC23.67■■□□□ 1.38
PCDHB11Q9Y5F2 RP9P-202ENST00000450133 1212 ntBASIC23.67■■□□□ 1.38
PCDHB11Q9Y5F2 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
PCDHB11Q9Y5F2 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC23.67■■□□□ 1.38
PCDHB11Q9Y5F2 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC23.67■■□□□ 1.38
PCDHB11Q9Y5F2 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
PCDHB11Q9Y5F2 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
PCDHB11Q9Y5F2 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
PCDHB11Q9Y5F2 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
PCDHB11Q9Y5F2 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
PCDHB11Q9Y5F2 BHLHE23-202ENST00000612929 1109 ntBASIC23.66■■□□□ 1.38
PCDHB11Q9Y5F2 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC23.66■■□□□ 1.38
PCDHB11Q9Y5F2 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC23.66■■□□□ 1.38
PCDHB11Q9Y5F2 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC23.66■■□□□ 1.38
PCDHB11Q9Y5F2 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC23.66■■□□□ 1.38
PCDHB11Q9Y5F2 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC23.66■■□□□ 1.38
PCDHB11Q9Y5F2 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC23.65■■□□□ 1.38
PCDHB11Q9Y5F2 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC23.65■■□□□ 1.38
PCDHB11Q9Y5F2 PFN2-211ENST00000489155 636 ntTSL 4 BASIC23.65■■□□□ 1.38
PCDHB11Q9Y5F2 MIR3960-201ENST00000583311 91 ntBASIC23.65■■□□□ 1.38
PCDHB11Q9Y5F2 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC23.65■■□□□ 1.38
PCDHB11Q9Y5F2 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
PCDHB11Q9Y5F2 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC23.65■■□□□ 1.38
PCDHB11Q9Y5F2 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC23.65■■□□□ 1.38
PCDHB11Q9Y5F2 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
PCDHB11Q9Y5F2 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
PCDHB11Q9Y5F2 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC23.64■■□□□ 1.37
PCDHB11Q9Y5F2 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC23.64■■□□□ 1.37
PCDHB11Q9Y5F2 AC026202.3-201ENST00000600805 1127 ntBASIC23.64■■□□□ 1.37
PCDHB11Q9Y5F2 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
PCDHB11Q9Y5F2 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
PCDHB11Q9Y5F2 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
PCDHB11Q9Y5F2 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC23.63■■□□□ 1.37
PCDHB11Q9Y5F2 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
PCDHB11Q9Y5F2 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
PCDHB11Q9Y5F2 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
PCDHB11Q9Y5F2 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC23.63■■□□□ 1.37
PCDHB11Q9Y5F2 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC23.63■■□□□ 1.37
PCDHB11Q9Y5F2 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC23.63■■□□□ 1.37
PCDHB11Q9Y5F2 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
PCDHB11Q9Y5F2 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC23.62■■□□□ 1.37
PCDHB11Q9Y5F2 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
PCDHB11Q9Y5F2 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC23.61■■□□□ 1.37
PCDHB11Q9Y5F2 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC23.61■■□□□ 1.37
PCDHB11Q9Y5F2 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC23.61■■□□□ 1.37
PCDHB11Q9Y5F2 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC23.61■■□□□ 1.37
PCDHB11Q9Y5F2 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC23.61■■□□□ 1.37
PCDHB11Q9Y5F2 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC23.61■■□□□ 1.37
PCDHB11Q9Y5F2 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
PCDHB11Q9Y5F2 AC093536.1-201ENST00000569153 554 ntBASIC23.61■■□□□ 1.37
PCDHB11Q9Y5F2 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC23.61■■□□□ 1.37
PCDHB11Q9Y5F2 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC23.61■■□□□ 1.37
PCDHB11Q9Y5F2 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
PCDHB11Q9Y5F2 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
PCDHB11Q9Y5F2 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC23.6■■□□□ 1.37
PCDHB11Q9Y5F2 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC23.59■■□□□ 1.37
PCDHB11Q9Y5F2 AL035685.1-201ENST00000636663 812 ntBASIC23.59■■□□□ 1.37
PCDHB11Q9Y5F2 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC23.59■■□□□ 1.37
PCDHB11Q9Y5F2 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
PCDHB11Q9Y5F2 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC23.59■■□□□ 1.37
PCDHB11Q9Y5F2 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
PCDHB11Q9Y5F2 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC23.59■■□□□ 1.37
PCDHB11Q9Y5F2 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC23.59■■□□□ 1.37
PCDHB11Q9Y5F2 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC23.59■■□□□ 1.37
PCDHB11Q9Y5F2 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC23.59■■□□□ 1.37
PCDHB11Q9Y5F2 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
PCDHB11Q9Y5F2 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
PCDHB11Q9Y5F2 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
PCDHB11Q9Y5F2 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC23.58■■□□□ 1.37
PCDHB11Q9Y5F2 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC23.58■■□□□ 1.37
PCDHB11Q9Y5F2 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
PCDHB11Q9Y5F2 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC23.58■■□□□ 1.36
PCDHB11Q9Y5F2 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC23.57■■□□□ 1.36
PCDHB11Q9Y5F2 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC23.57■■□□□ 1.36
PCDHB11Q9Y5F2 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
PCDHB11Q9Y5F2 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
PCDHB11Q9Y5F2 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC23.57■■□□□ 1.36
PCDHB11Q9Y5F2 AC074183.2-201ENST00000623112 922 ntBASIC23.57■■□□□ 1.36
PCDHB11Q9Y5F2 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC23.57■■□□□ 1.36
PCDHB11Q9Y5F2 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC23.57■■□□□ 1.36
PCDHB11Q9Y5F2 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC23.57■■□□□ 1.36
PCDHB11Q9Y5F2 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC23.57■■□□□ 1.36
PCDHB11Q9Y5F2 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC23.56■■□□□ 1.36
PCDHB11Q9Y5F2 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC23.56■■□□□ 1.36
PCDHB11Q9Y5F2 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
PCDHB11Q9Y5F2 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
PCDHB11Q9Y5F2 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC23.55■■□□□ 1.36
PCDHB11Q9Y5F2 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC23.55■■□□□ 1.36
PCDHB11Q9Y5F2 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC23.55■■□□□ 1.36
PCDHB11Q9Y5F2 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC23.55■■□□□ 1.36
PCDHB11Q9Y5F2 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC23.55■■□□□ 1.36
PCDHB11Q9Y5F2 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
PCDHB11Q9Y5F2 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
PCDHB11Q9Y5F2 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
PCDHB11Q9Y5F2 DUX4L9-201ENST00000449051 1259 ntBASIC23.54■■□□□ 1.36
PCDHB11Q9Y5F2 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
PCDHB11Q9Y5F2 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC23.54■■□□□ 1.36
PCDHB11Q9Y5F2 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
Retrieved 100 of 98,524 protein–RNA pairs in 108.1 ms