Protein–RNA interactions for Protein: Q9UPA5

BSN, Protein bassoon, humanhuman

Predictions only

Length 3,926 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BSNQ9UPA5 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
BSNQ9UPA5 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC22.27■■□□□ 1.16
BSNQ9UPA5 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC22.27■■□□□ 1.16
BSNQ9UPA5 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC22.26■■□□□ 1.15
BSNQ9UPA5 KRT16P3-201ENST00000439127 1283 ntBASIC22.26■■□□□ 1.15
BSNQ9UPA5 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
BSNQ9UPA5 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC22.26■■□□□ 1.15
BSNQ9UPA5 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC22.26■■□□□ 1.15
BSNQ9UPA5 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC22.26■■□□□ 1.15
BSNQ9UPA5 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
BSNQ9UPA5 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC22.26■■□□□ 1.15
BSNQ9UPA5 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
BSNQ9UPA5 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
BSNQ9UPA5 RPS2P7-201ENST00000447334 885 ntBASIC22.25■■□□□ 1.15
BSNQ9UPA5 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
BSNQ9UPA5 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC22.25■■□□□ 1.15
BSNQ9UPA5 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC22.25■■□□□ 1.15
BSNQ9UPA5 AL117332.1-201ENST00000622628 974 ntBASIC22.25■■□□□ 1.15
BSNQ9UPA5 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
BSNQ9UPA5 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC22.25■■□□□ 1.15
BSNQ9UPA5 AC005837.3-201ENST00000612163 286 ntBASIC22.25■■□□□ 1.15
BSNQ9UPA5 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC22.25■■□□□ 1.15
BSNQ9UPA5 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
BSNQ9UPA5 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC22.25■■□□□ 1.15
BSNQ9UPA5 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
BSNQ9UPA5 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC22.25■■□□□ 1.15
BSNQ9UPA5 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC22.25■■□□□ 1.15
BSNQ9UPA5 AL136116.3-201ENST00000402907 1138 ntBASIC22.24■■□□□ 1.15
BSNQ9UPA5 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC22.24■■□□□ 1.15
BSNQ9UPA5 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC22.24■■□□□ 1.15
BSNQ9UPA5 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC22.24■■□□□ 1.15
BSNQ9UPA5 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC22.24■■□□□ 1.15
BSNQ9UPA5 MIR4466-201ENST00000606121 54 ntBASIC22.23■■□□□ 1.15
BSNQ9UPA5 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC22.23■■□□□ 1.15
BSNQ9UPA5 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC22.23■■□□□ 1.15
BSNQ9UPA5 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC22.23■■□□□ 1.15
BSNQ9UPA5 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC22.23■■□□□ 1.15
BSNQ9UPA5 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
BSNQ9UPA5 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
BSNQ9UPA5 WHAMMP3-201ENST00000611636 1609 ntBASIC22.23■■□□□ 1.15
BSNQ9UPA5 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC22.22■■□□□ 1.15
BSNQ9UPA5 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC22.22■■□□□ 1.15
BSNQ9UPA5 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC22.22■■□□□ 1.15
BSNQ9UPA5 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC22.22■■□□□ 1.15
BSNQ9UPA5 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
BSNQ9UPA5 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC22.21■■□□□ 1.15
BSNQ9UPA5 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
BSNQ9UPA5 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
BSNQ9UPA5 NALT1-201ENST00000429224 738 ntTSL 5 BASIC22.21■■□□□ 1.15
BSNQ9UPA5 AL512631.2-201ENST00000604634 923 ntBASIC22.21■■□□□ 1.15
BSNQ9UPA5 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
BSNQ9UPA5 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.15
BSNQ9UPA5 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC22.2■■□□□ 1.14
BSNQ9UPA5 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC22.2■■□□□ 1.14
BSNQ9UPA5 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC22.2■■□□□ 1.14
BSNQ9UPA5 ZNRF2P3-201ENST00000424200 374 ntBASIC22.2■■□□□ 1.14
BSNQ9UPA5 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
BSNQ9UPA5 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC22.19■■□□□ 1.14
BSNQ9UPA5 TRIR-202ENST00000588213 841 ntTSL 3 BASIC22.19■■□□□ 1.14
BSNQ9UPA5 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
BSNQ9UPA5 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
BSNQ9UPA5 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
BSNQ9UPA5 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC22.19■■□□□ 1.14
BSNQ9UPA5 AC137630.3-201ENST00000607245 391 ntBASIC22.19■■□□□ 1.14
BSNQ9UPA5 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
BSNQ9UPA5 AP002414.2-202ENST00000590929 1450 ntBASIC22.19■■□□□ 1.14
BSNQ9UPA5 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC22.19■■□□□ 1.14
BSNQ9UPA5 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC22.18■■□□□ 1.14
BSNQ9UPA5 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC22.18■■□□□ 1.14
BSNQ9UPA5 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
BSNQ9UPA5 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
BSNQ9UPA5 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC22.18■■□□□ 1.14
BSNQ9UPA5 AC133561.4-201ENST00000566112 224 ntBASIC22.18■■□□□ 1.14
BSNQ9UPA5 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC22.18■■□□□ 1.14
BSNQ9UPA5 ABCB10P1-201ENST00000614297 2181 ntBASIC22.18■■□□□ 1.14
BSNQ9UPA5 AC021242.3-201ENST00000607598 1377 ntBASIC22.18■■□□□ 1.14
BSNQ9UPA5 LFNG-201ENST00000222725 2377 ntAPPRIS P4 TSL 5 BASIC22.18■■□□□ 1.14
BSNQ9UPA5 BX664725.1-201ENST00000438252 379 ntBASIC22.18■■□□□ 1.14
BSNQ9UPA5 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC22.18■■□□□ 1.14
BSNQ9UPA5 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
BSNQ9UPA5 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC22.17■■□□□ 1.14
BSNQ9UPA5 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
BSNQ9UPA5 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC22.17■■□□□ 1.14
BSNQ9UPA5 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
BSNQ9UPA5 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
BSNQ9UPA5 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
BSNQ9UPA5 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC22.16■■□□□ 1.14
BSNQ9UPA5 AC092028.1-203ENST00000608262 953 ntBASIC22.16■■□□□ 1.14
BSNQ9UPA5 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
BSNQ9UPA5 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
BSNQ9UPA5 AC092666.2-201ENST00000613287 246 ntBASIC22.15■■□□□ 1.14
BSNQ9UPA5 AC096631.2-201ENST00000436136 790 ntBASIC22.15■■□□□ 1.14
BSNQ9UPA5 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC22.15■■□□□ 1.14
BSNQ9UPA5 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC22.15■■□□□ 1.14
BSNQ9UPA5 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC22.15■■□□□ 1.14
BSNQ9UPA5 SRR-208ENST00000576848 588 ntTSL 4 BASIC22.15■■□□□ 1.14
BSNQ9UPA5 AC026271.2-201ENST00000428091 497 ntBASIC22.14■■□□□ 1.14
BSNQ9UPA5 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
BSNQ9UPA5 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC22.14■■□□□ 1.14
BSNQ9UPA5 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC22.14■■□□□ 1.14
Retrieved 100 of 98,524 protein–RNA pairs in 42.6 ms