Protein–RNA interactions for Protein: Q9NZP6

NPAP1, Nuclear pore-associated protein 1, humanhuman

Predictions only

Length 1,156 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAP1Q9NZP6 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
NPAP1Q9NZP6 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC21.88■■□□□ 1.09
NPAP1Q9NZP6 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
NPAP1Q9NZP6 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
NPAP1Q9NZP6 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
NPAP1Q9NZP6 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
NPAP1Q9NZP6 AP002414.2-202ENST00000590929 1450 ntBASIC21.87■■□□□ 1.09
NPAP1Q9NZP6 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
NPAP1Q9NZP6 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
NPAP1Q9NZP6 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
NPAP1Q9NZP6 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
NPAP1Q9NZP6 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
NPAP1Q9NZP6 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC21.86■■□□□ 1.09
NPAP1Q9NZP6 MED25-210ENST00000612854 801 ntTSL 5 BASIC21.86■■□□□ 1.09
NPAP1Q9NZP6 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
NPAP1Q9NZP6 MED25-214ENST00000622402 642 ntTSL 5 BASIC21.86■■□□□ 1.09
NPAP1Q9NZP6 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
NPAP1Q9NZP6 AC133561.1-201ENST00000568600 2415 ntBASIC21.86■■□□□ 1.09
NPAP1Q9NZP6 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC21.85■■□□□ 1.09
NPAP1Q9NZP6 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
NPAP1Q9NZP6 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
NPAP1Q9NZP6 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
NPAP1Q9NZP6 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC21.85■■□□□ 1.09
NPAP1Q9NZP6 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC21.85■■□□□ 1.09
NPAP1Q9NZP6 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC21.85■■□□□ 1.09
NPAP1Q9NZP6 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC21.85■■□□□ 1.09
NPAP1Q9NZP6 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC21.85■■□□□ 1.09
NPAP1Q9NZP6 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC21.85■■□□□ 1.09
NPAP1Q9NZP6 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
NPAP1Q9NZP6 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
NPAP1Q9NZP6 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC21.84■■□□□ 1.09
NPAP1Q9NZP6 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
NPAP1Q9NZP6 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
NPAP1Q9NZP6 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC21.83■■□□□ 1.09
NPAP1Q9NZP6 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC21.83■■□□□ 1.09
NPAP1Q9NZP6 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
NPAP1Q9NZP6 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
NPAP1Q9NZP6 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
NPAP1Q9NZP6 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC21.82■■□□□ 1.08
NPAP1Q9NZP6 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC21.82■■□□□ 1.08
NPAP1Q9NZP6 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
NPAP1Q9NZP6 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC21.81■■□□□ 1.08
NPAP1Q9NZP6 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
NPAP1Q9NZP6 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC21.8■■□□□ 1.08
NPAP1Q9NZP6 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
NPAP1Q9NZP6 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
NPAP1Q9NZP6 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC21.8■■□□□ 1.08
NPAP1Q9NZP6 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC21.8■■□□□ 1.08
NPAP1Q9NZP6 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
NPAP1Q9NZP6 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
NPAP1Q9NZP6 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
NPAP1Q9NZP6 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
NPAP1Q9NZP6 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
NPAP1Q9NZP6 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
NPAP1Q9NZP6 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC21.79■■□□□ 1.08
NPAP1Q9NZP6 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
NPAP1Q9NZP6 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
NPAP1Q9NZP6 HES4-202ENST00000428771 1040 ntTSL 2 BASIC21.78■■□□□ 1.08
NPAP1Q9NZP6 ABHD17AP5-201ENST00000580133 923 ntBASIC21.78■■□□□ 1.08
NPAP1Q9NZP6 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC21.78■■□□□ 1.08
NPAP1Q9NZP6 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC21.78■■□□□ 1.08
NPAP1Q9NZP6 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
NPAP1Q9NZP6 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC21.77■■□□□ 1.08
NPAP1Q9NZP6 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
NPAP1Q9NZP6 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
NPAP1Q9NZP6 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC21.77■■□□□ 1.08
NPAP1Q9NZP6 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC21.77■■□□□ 1.08
NPAP1Q9NZP6 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC21.77■■□□□ 1.08
NPAP1Q9NZP6 AC092296.2-201ENST00000589470 999 ntBASIC21.77■■□□□ 1.08
NPAP1Q9NZP6 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC21.77■■□□□ 1.08
NPAP1Q9NZP6 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC21.77■■□□□ 1.08
NPAP1Q9NZP6 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
NPAP1Q9NZP6 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC21.77■■□□□ 1.08
NPAP1Q9NZP6 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC21.77■■□□□ 1.07
NPAP1Q9NZP6 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
NPAP1Q9NZP6 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.07
NPAP1Q9NZP6 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC21.77■■□□□ 1.07
NPAP1Q9NZP6 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
NPAP1Q9NZP6 AC126177.7-201ENST00000547904 679 ntBASIC21.76■■□□□ 1.07
NPAP1Q9NZP6 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
NPAP1Q9NZP6 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
NPAP1Q9NZP6 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
NPAP1Q9NZP6 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC21.75■■□□□ 1.07
NPAP1Q9NZP6 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
NPAP1Q9NZP6 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC21.75■■□□□ 1.07
NPAP1Q9NZP6 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC21.75■■□□□ 1.07
NPAP1Q9NZP6 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC21.74■■□□□ 1.07
NPAP1Q9NZP6 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC21.74■■□□□ 1.07
NPAP1Q9NZP6 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
NPAP1Q9NZP6 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
NPAP1Q9NZP6 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
NPAP1Q9NZP6 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC21.74■■□□□ 1.07
NPAP1Q9NZP6 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC21.74■■□□□ 1.07
NPAP1Q9NZP6 AC079834.2-201ENST00000609776 1949 ntBASIC21.74■■□□□ 1.07
NPAP1Q9NZP6 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC21.73■■□□□ 1.07
NPAP1Q9NZP6 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC21.73■■□□□ 1.07
NPAP1Q9NZP6 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
NPAP1Q9NZP6 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC21.73■■□□□ 1.07
NPAP1Q9NZP6 AL157400.5-201ENST00000507624 621 ntBASIC21.73■■□□□ 1.07
NPAP1Q9NZP6 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 55 ms