Protein–RNA interactions for Protein: Q9HCU0

CD248, Endosialin, humanhuman

Predictions only

Length 757 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD248Q9HCU0 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC25.18■■□□□ 1.62
CD248Q9HCU0 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC25.18■■□□□ 1.62
CD248Q9HCU0 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC25.18■■□□□ 1.62
CD248Q9HCU0 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC25.17■■□□□ 1.62
CD248Q9HCU0 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC25.17■■□□□ 1.62
CD248Q9HCU0 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC25.17■■□□□ 1.62
CD248Q9HCU0 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
CD248Q9HCU0 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
CD248Q9HCU0 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
CD248Q9HCU0 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC25.16■■□□□ 1.62
CD248Q9HCU0 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC25.16■■□□□ 1.62
CD248Q9HCU0 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
CD248Q9HCU0 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC25.15■■□□□ 1.62
CD248Q9HCU0 RARRES2P1-201ENST00000474487 481 ntBASIC25.15■■□□□ 1.62
CD248Q9HCU0 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
CD248Q9HCU0 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
CD248Q9HCU0 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC25.15■■□□□ 1.62
CD248Q9HCU0 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
CD248Q9HCU0 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC25.14■■□□□ 1.62
CD248Q9HCU0 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
CD248Q9HCU0 RAP2CP1-202ENST00000605179 643 ntBASIC25.14■■□□□ 1.62
CD248Q9HCU0 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC25.14■■□□□ 1.61
CD248Q9HCU0 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC25.13■■□□□ 1.61
CD248Q9HCU0 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
CD248Q9HCU0 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
CD248Q9HCU0 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC25.13■■□□□ 1.61
CD248Q9HCU0 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC25.13■■□□□ 1.61
CD248Q9HCU0 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
CD248Q9HCU0 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
CD248Q9HCU0 RP9P-202ENST00000450133 1212 ntBASIC25.12■■□□□ 1.61
CD248Q9HCU0 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC25.12■■□□□ 1.61
CD248Q9HCU0 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC25.12■■□□□ 1.61
CD248Q9HCU0 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC25.12■■□□□ 1.61
CD248Q9HCU0 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
CD248Q9HCU0 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC25.12■■□□□ 1.61
CD248Q9HCU0 AC020928.2-201ENST00000588717 2197 ntBASIC25.12■■□□□ 1.61
CD248Q9HCU0 SHF-208ENST00000560734 1731 ntTSL 3 BASIC25.12■■□□□ 1.61
CD248Q9HCU0 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC25.12■■□□□ 1.61
CD248Q9HCU0 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
CD248Q9HCU0 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
CD248Q9HCU0 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
CD248Q9HCU0 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC25.1■■□□□ 1.61
CD248Q9HCU0 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC25.1■■□□□ 1.61
CD248Q9HCU0 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC25.1■■□□□ 1.61
CD248Q9HCU0 HES4-204ENST00000484667 667 ntTSL 3 BASIC25.1■■□□□ 1.61
CD248Q9HCU0 DUX4L18-201ENST00000553347 1267 ntBASIC25.1■■□□□ 1.61
CD248Q9HCU0 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
CD248Q9HCU0 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
CD248Q9HCU0 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC25.09■■□□□ 1.61
CD248Q9HCU0 AC093536.1-201ENST00000569153 554 ntBASIC25.09■■□□□ 1.61
CD248Q9HCU0 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC25.09■■□□□ 1.61
CD248Q9HCU0 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
CD248Q9HCU0 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC25.09■■□□□ 1.61
CD248Q9HCU0 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC25.08■■□□□ 1.61
CD248Q9HCU0 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC25.08■■□□□ 1.61
CD248Q9HCU0 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC25.08■■□□□ 1.61
CD248Q9HCU0 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC25.08■■□□□ 1.61
CD248Q9HCU0 PFN2-211ENST00000489155 636 ntTSL 4 BASIC25.08■■□□□ 1.61
CD248Q9HCU0 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC25.08■■□□□ 1.61
CD248Q9HCU0 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC25.08■■□□□ 1.61
CD248Q9HCU0 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC25.08■■□□□ 1.61
CD248Q9HCU0 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC25.08■■□□□ 1.61
CD248Q9HCU0 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC25.08■■□□□ 1.61
CD248Q9HCU0 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC25.08■■□□□ 1.6
CD248Q9HCU0 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.6
CD248Q9HCU0 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.6
CD248Q9HCU0 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
CD248Q9HCU0 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC25.07■■□□□ 1.6
CD248Q9HCU0 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
CD248Q9HCU0 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
CD248Q9HCU0 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC25.07■■□□□ 1.6
CD248Q9HCU0 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC25.06■■□□□ 1.6
CD248Q9HCU0 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC25.06■■□□□ 1.6
CD248Q9HCU0 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
CD248Q9HCU0 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC25.06■■□□□ 1.6
CD248Q9HCU0 DUX4L9-201ENST00000449051 1259 ntBASIC25.06■■□□□ 1.6
CD248Q9HCU0 SPCS2P3-201ENST00000500401 656 ntBASIC25.06■■□□□ 1.6
CD248Q9HCU0 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC25.05■■□□□ 1.6
CD248Q9HCU0 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC25.05■■□□□ 1.6
CD248Q9HCU0 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC25.05■■□□□ 1.6
CD248Q9HCU0 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC25.05■■□□□ 1.6
CD248Q9HCU0 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
CD248Q9HCU0 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC25.04■■□□□ 1.6
CD248Q9HCU0 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC25.04■■□□□ 1.6
CD248Q9HCU0 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC25.04■■□□□ 1.6
CD248Q9HCU0 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC25.04■■□□□ 1.6
CD248Q9HCU0 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
CD248Q9HCU0 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC25.04■■□□□ 1.6
CD248Q9HCU0 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC25.04■■□□□ 1.6
CD248Q9HCU0 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC25.04■■□□□ 1.6
CD248Q9HCU0 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
CD248Q9HCU0 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
CD248Q9HCU0 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC25.03■■□□□ 1.6
CD248Q9HCU0 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC25.03■■□□□ 1.6
CD248Q9HCU0 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC25.03■■□□□ 1.6
CD248Q9HCU0 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
CD248Q9HCU0 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
CD248Q9HCU0 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
CD248Q9HCU0 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC25.02■■□□□ 1.6
CD248Q9HCU0 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
Retrieved 100 of 98,524 protein–RNA pairs in 100.5 ms