Protein–RNA interactions for Protein: Q9HC36

MRM3, rRNA methyltransferase 3, mitochondrial, humanhuman

Known RBP Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRM3Q9HC36 SRP68-213ENST00000629930 165 ntTSL 5 BASIC24.3■■□□□ 1.48
MRM3Q9HC36 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
MRM3Q9HC36 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC24.3■■□□□ 1.48
MRM3Q9HC36 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
MRM3Q9HC36 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC24.3■■□□□ 1.48
MRM3Q9HC36 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
MRM3Q9HC36 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC24.3■■□□□ 1.48
MRM3Q9HC36 AC096887.2-201ENST00000623443 1957 ntBASIC24.29■■□□□ 1.48
MRM3Q9HC36 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC24.29■■□□□ 1.48
MRM3Q9HC36 PFN2-211ENST00000489155 636 ntTSL 4 BASIC24.29■■□□□ 1.48
MRM3Q9HC36 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC24.29■■□□□ 1.48
MRM3Q9HC36 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
MRM3Q9HC36 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC24.29■■□□□ 1.48
MRM3Q9HC36 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
MRM3Q9HC36 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
MRM3Q9HC36 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
MRM3Q9HC36 AC092296.2-201ENST00000589470 999 ntBASIC24.28■■□□□ 1.48
MRM3Q9HC36 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC24.28■■□□□ 1.48
MRM3Q9HC36 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC24.28■■□□□ 1.48
MRM3Q9HC36 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
MRM3Q9HC36 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC24.27■■□□□ 1.48
MRM3Q9HC36 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
MRM3Q9HC36 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
MRM3Q9HC36 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC24.27■■□□□ 1.48
MRM3Q9HC36 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
MRM3Q9HC36 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
MRM3Q9HC36 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC24.26■■□□□ 1.47
MRM3Q9HC36 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC24.26■■□□□ 1.47
MRM3Q9HC36 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC24.25■■□□□ 1.47
MRM3Q9HC36 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
MRM3Q9HC36 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC24.25■■□□□ 1.47
MRM3Q9HC36 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
MRM3Q9HC36 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC24.25■■□□□ 1.47
MRM3Q9HC36 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
MRM3Q9HC36 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
MRM3Q9HC36 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC24.24■■□□□ 1.47
MRM3Q9HC36 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
MRM3Q9HC36 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC24.24■■□□□ 1.47
MRM3Q9HC36 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC24.23■■□□□ 1.47
MRM3Q9HC36 MIR3960-201ENST00000583311 91 ntBASIC24.23■■□□□ 1.47
MRM3Q9HC36 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC24.23■■□□□ 1.47
MRM3Q9HC36 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC24.23■■□□□ 1.47
MRM3Q9HC36 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC24.23■■□□□ 1.47
MRM3Q9HC36 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
MRM3Q9HC36 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
MRM3Q9HC36 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
MRM3Q9HC36 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
MRM3Q9HC36 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC24.22■■□□□ 1.47
MRM3Q9HC36 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
MRM3Q9HC36 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
MRM3Q9HC36 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC24.22■■□□□ 1.47
MRM3Q9HC36 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
MRM3Q9HC36 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC24.22■■□□□ 1.47
MRM3Q9HC36 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
MRM3Q9HC36 SMPD5-203ENST00000639008 1464 ntBASIC24.21■■□□□ 1.47
MRM3Q9HC36 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
MRM3Q9HC36 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
MRM3Q9HC36 ECEL1P2-201ENST00000461596 1295 ntBASIC24.21■■□□□ 1.47
MRM3Q9HC36 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC24.21■■□□□ 1.47
MRM3Q9HC36 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC24.21■■□□□ 1.47
MRM3Q9HC36 AC135731.1-201ENST00000569415 2548 ntBASIC24.21■■□□□ 1.47
MRM3Q9HC36 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC24.2■■□□□ 1.46
MRM3Q9HC36 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC24.2■■□□□ 1.46
MRM3Q9HC36 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
MRM3Q9HC36 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC24.2■■□□□ 1.46
MRM3Q9HC36 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
MRM3Q9HC36 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC24.2■■□□□ 1.46
MRM3Q9HC36 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC24.19■■□□□ 1.46
MRM3Q9HC36 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
MRM3Q9HC36 AC022413.1-201ENST00000624602 984 ntBASIC24.19■■□□□ 1.46
MRM3Q9HC36 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC24.19■■□□□ 1.46
MRM3Q9HC36 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC24.18■■□□□ 1.46
MRM3Q9HC36 REST-210ENST00000638187 1334 ntTSL 5 BASIC24.18■■□□□ 1.46
MRM3Q9HC36 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC24.18■■□□□ 1.46
MRM3Q9HC36 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC24.18■■□□□ 1.46
MRM3Q9HC36 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC24.18■■□□□ 1.46
MRM3Q9HC36 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
MRM3Q9HC36 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC24.18■■□□□ 1.46
MRM3Q9HC36 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
MRM3Q9HC36 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC24.17■■□□□ 1.46
MRM3Q9HC36 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
MRM3Q9HC36 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC24.17■■□□□ 1.46
MRM3Q9HC36 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC24.17■■□□□ 1.46
MRM3Q9HC36 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC24.16■■□□□ 1.46
MRM3Q9HC36 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC24.16■■□□□ 1.46
MRM3Q9HC36 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC24.15■■□□□ 1.46
MRM3Q9HC36 CEBPA-AS1-201ENST00000592982 2198 ntBASIC24.15■■□□□ 1.46
MRM3Q9HC36 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC24.15■■□□□ 1.46
MRM3Q9HC36 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
MRM3Q9HC36 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC24.15■■□□□ 1.46
MRM3Q9HC36 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC24.15■■□□□ 1.46
MRM3Q9HC36 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
MRM3Q9HC36 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
MRM3Q9HC36 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC24.14■■□□□ 1.45
MRM3Q9HC36 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC24.14■■□□□ 1.45
MRM3Q9HC36 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC24.14■■□□□ 1.45
MRM3Q9HC36 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC24.14■■□□□ 1.45
MRM3Q9HC36 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
MRM3Q9HC36 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC24.13■■□□□ 1.45
MRM3Q9HC36 CEP120-209ENST00000515110 606 ntTSL 3 BASIC24.13■■□□□ 1.45
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms