Protein–RNA interactions for Protein: Q99500

S1PR3, Sphingosine 1-phosphate receptor 3, humanhuman

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
S1PR3Q99500 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
S1PR3Q99500 AC020928.2-201ENST00000588717 2197 ntBASIC19.85■□□□□ 0.77
S1PR3Q99500 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC19.85■□□□□ 0.77
S1PR3Q99500 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
S1PR3Q99500 TPT1-202ENST00000379055 948 ntTSL 2 BASIC19.84■□□□□ 0.77
S1PR3Q99500 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
S1PR3Q99500 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
S1PR3Q99500 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
S1PR3Q99500 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
S1PR3Q99500 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
S1PR3Q99500 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
S1PR3Q99500 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC19.83■□□□□ 0.77
S1PR3Q99500 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
S1PR3Q99500 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
S1PR3Q99500 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC19.82■□□□□ 0.76
S1PR3Q99500 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
S1PR3Q99500 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
S1PR3Q99500 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
S1PR3Q99500 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
S1PR3Q99500 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
S1PR3Q99500 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
S1PR3Q99500 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC19.82■□□□□ 0.76
S1PR3Q99500 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
S1PR3Q99500 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC19.82■□□□□ 0.76
S1PR3Q99500 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
S1PR3Q99500 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
S1PR3Q99500 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
S1PR3Q99500 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
S1PR3Q99500 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
S1PR3Q99500 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
S1PR3Q99500 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC19.81■□□□□ 0.76
S1PR3Q99500 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
S1PR3Q99500 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
S1PR3Q99500 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
S1PR3Q99500 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC19.81■□□□□ 0.76
S1PR3Q99500 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC19.81■□□□□ 0.76
S1PR3Q99500 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC19.81■□□□□ 0.76
S1PR3Q99500 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC19.81■□□□□ 0.76
S1PR3Q99500 SRP68-213ENST00000629930 165 ntTSL 5 BASIC19.81■□□□□ 0.76
S1PR3Q99500 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
S1PR3Q99500 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
S1PR3Q99500 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
S1PR3Q99500 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
S1PR3Q99500 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
S1PR3Q99500 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC19.8■□□□□ 0.76
S1PR3Q99500 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
S1PR3Q99500 AC010501.1-201ENST00000606270 1962 ntBASIC19.79■□□□□ 0.76
S1PR3Q99500 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
S1PR3Q99500 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
S1PR3Q99500 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
S1PR3Q99500 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
S1PR3Q99500 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
S1PR3Q99500 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
S1PR3Q99500 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
S1PR3Q99500 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
S1PR3Q99500 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC19.78■□□□□ 0.76
S1PR3Q99500 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC19.78■□□□□ 0.76
S1PR3Q99500 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
S1PR3Q99500 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC19.77■□□□□ 0.76
S1PR3Q99500 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
S1PR3Q99500 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
S1PR3Q99500 AC135731.1-201ENST00000569415 2548 ntBASIC19.77■□□□□ 0.76
S1PR3Q99500 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC19.77■□□□□ 0.76
S1PR3Q99500 ERN1-208ENST00000606895 2068 ntBASIC19.77■□□□□ 0.75
S1PR3Q99500 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.75
S1PR3Q99500 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
S1PR3Q99500 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
S1PR3Q99500 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
S1PR3Q99500 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC19.76■□□□□ 0.75
S1PR3Q99500 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
S1PR3Q99500 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC19.76■□□□□ 0.75
S1PR3Q99500 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
S1PR3Q99500 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
S1PR3Q99500 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
S1PR3Q99500 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
S1PR3Q99500 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
S1PR3Q99500 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
S1PR3Q99500 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
S1PR3Q99500 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
S1PR3Q99500 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
S1PR3Q99500 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
S1PR3Q99500 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
S1PR3Q99500 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC19.74■□□□□ 0.75
S1PR3Q99500 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
S1PR3Q99500 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
S1PR3Q99500 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
S1PR3Q99500 CEP120-209ENST00000515110 606 ntTSL 3 BASIC19.73■□□□□ 0.75
S1PR3Q99500 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
S1PR3Q99500 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
S1PR3Q99500 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC19.72■□□□□ 0.75
S1PR3Q99500 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC19.72■□□□□ 0.75
S1PR3Q99500 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
S1PR3Q99500 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC19.72■□□□□ 0.75
S1PR3Q99500 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC19.72■□□□□ 0.75
S1PR3Q99500 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC19.72■□□□□ 0.75
S1PR3Q99500 AC060814.1-201ENST00000554326 538 ntBASIC19.72■□□□□ 0.75
S1PR3Q99500 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
S1PR3Q99500 AC022413.1-201ENST00000624602 984 ntBASIC19.72■□□□□ 0.75
S1PR3Q99500 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC19.72■□□□□ 0.75
S1PR3Q99500 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms