Protein–RNA interactions for Protein: Q96S21

RAB40C, Ras-related protein Rab-40C, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40CQ96S21 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
RAB40CQ96S21 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
RAB40CQ96S21 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC19.51■□□□□ 0.71
RAB40CQ96S21 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
RAB40CQ96S21 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
RAB40CQ96S21 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC19.5■□□□□ 0.71
RAB40CQ96S21 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC19.49■□□□□ 0.71
RAB40CQ96S21 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
RAB40CQ96S21 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC19.49■□□□□ 0.71
RAB40CQ96S21 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC19.49■□□□□ 0.71
RAB40CQ96S21 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
RAB40CQ96S21 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC19.48■□□□□ 0.71
RAB40CQ96S21 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
RAB40CQ96S21 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
RAB40CQ96S21 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
RAB40CQ96S21 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC19.48■□□□□ 0.71
RAB40CQ96S21 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
RAB40CQ96S21 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
RAB40CQ96S21 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
RAB40CQ96S21 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC19.48■□□□□ 0.71
RAB40CQ96S21 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
RAB40CQ96S21 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
RAB40CQ96S21 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
RAB40CQ96S21 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
RAB40CQ96S21 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
RAB40CQ96S21 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
RAB40CQ96S21 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
RAB40CQ96S21 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
RAB40CQ96S21 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
RAB40CQ96S21 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
RAB40CQ96S21 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RAB40CQ96S21 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC19.46■□□□□ 0.71
RAB40CQ96S21 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
RAB40CQ96S21 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
RAB40CQ96S21 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
RAB40CQ96S21 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RAB40CQ96S21 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RAB40CQ96S21 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
RAB40CQ96S21 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
RAB40CQ96S21 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC19.45■□□□□ 0.7
RAB40CQ96S21 CIB2-204ENST00000557846 934 ntTSL 3 BASIC19.45■□□□□ 0.7
RAB40CQ96S21 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
RAB40CQ96S21 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
RAB40CQ96S21 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC19.45■□□□□ 0.7
RAB40CQ96S21 AC096887.2-201ENST00000623443 1957 ntBASIC19.44■□□□□ 0.7
RAB40CQ96S21 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RAB40CQ96S21 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
RAB40CQ96S21 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RAB40CQ96S21 AL162393.1-201ENST00000437852 946 ntBASIC19.44■□□□□ 0.7
RAB40CQ96S21 NRG1-221ENST00000614767 762 ntTSL 5 BASIC19.44■□□□□ 0.7
RAB40CQ96S21 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RAB40CQ96S21 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC19.44■□□□□ 0.7
RAB40CQ96S21 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC19.43■□□□□ 0.7
RAB40CQ96S21 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
RAB40CQ96S21 EED-207ENST00000528180 1745 ntTSL 5 BASIC19.43■□□□□ 0.7
RAB40CQ96S21 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
RAB40CQ96S21 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC19.43■□□□□ 0.7
RAB40CQ96S21 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
RAB40CQ96S21 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
RAB40CQ96S21 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
RAB40CQ96S21 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RAB40CQ96S21 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
RAB40CQ96S21 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
RAB40CQ96S21 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC19.42■□□□□ 0.7
RAB40CQ96S21 RPS2-210ENST00000530225 765 ntTSL 2 BASIC19.42■□□□□ 0.7
RAB40CQ96S21 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
RAB40CQ96S21 AP003733.4-201ENST00000623785 1697 ntBASIC19.42■□□□□ 0.7
RAB40CQ96S21 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
RAB40CQ96S21 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC19.41■□□□□ 0.7
RAB40CQ96S21 AC012676.1-201ENST00000574705 1949 ntBASIC19.41■□□□□ 0.7
RAB40CQ96S21 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RAB40CQ96S21 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RAB40CQ96S21 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
RAB40CQ96S21 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RAB40CQ96S21 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
RAB40CQ96S21 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RAB40CQ96S21 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC19.41■□□□□ 0.7
RAB40CQ96S21 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC19.4■□□□□ 0.7
RAB40CQ96S21 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RAB40CQ96S21 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
RAB40CQ96S21 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RAB40CQ96S21 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RAB40CQ96S21 AC087741.3-201ENST00000624270 1347 ntBASIC19.4■□□□□ 0.7
RAB40CQ96S21 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
RAB40CQ96S21 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RAB40CQ96S21 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RAB40CQ96S21 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RAB40CQ96S21 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RAB40CQ96S21 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC19.39■□□□□ 0.69
RAB40CQ96S21 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
RAB40CQ96S21 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC19.39■□□□□ 0.69
RAB40CQ96S21 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RAB40CQ96S21 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC19.39■□□□□ 0.69
RAB40CQ96S21 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
RAB40CQ96S21 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC19.38■□□□□ 0.69
RAB40CQ96S21 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
RAB40CQ96S21 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
RAB40CQ96S21 LINC01124-201ENST00000409786 2117 ntBASIC19.38■□□□□ 0.69
RAB40CQ96S21 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC19.38■□□□□ 0.69
RAB40CQ96S21 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms