Protein–RNA interactions for Protein: Q8WVM8

SCFD1, Sec1 family domain-containing protein 1, humanhuman

Predictions only

Length 642 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1Q8WVM8 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC26.72■■□□□ 1.87
SCFD1Q8WVM8 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC26.72■■□□□ 1.87
SCFD1Q8WVM8 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC26.72■■□□□ 1.87
SCFD1Q8WVM8 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC26.71■■□□□ 1.87
SCFD1Q8WVM8 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC26.71■■□□□ 1.87
SCFD1Q8WVM8 MIR3960-201ENST00000583311 91 ntBASIC26.71■■□□□ 1.87
SCFD1Q8WVM8 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
SCFD1Q8WVM8 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC26.71■■□□□ 1.87
SCFD1Q8WVM8 REST-210ENST00000638187 1334 ntTSL 5 BASIC26.7■■□□□ 1.87
SCFD1Q8WVM8 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC26.7■■□□□ 1.86
SCFD1Q8WVM8 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC26.69■■□□□ 1.86
SCFD1Q8WVM8 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
SCFD1Q8WVM8 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC26.69■■□□□ 1.86
SCFD1Q8WVM8 HES4-202ENST00000428771 1040 ntTSL 2 BASIC26.69■■□□□ 1.86
SCFD1Q8WVM8 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC26.69■■□□□ 1.86
SCFD1Q8WVM8 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC26.69■■□□□ 1.86
SCFD1Q8WVM8 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC26.69■■□□□ 1.86
SCFD1Q8WVM8 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC26.69■■□□□ 1.86
SCFD1Q8WVM8 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC26.69■■□□□ 1.86
SCFD1Q8WVM8 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
SCFD1Q8WVM8 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
SCFD1Q8WVM8 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
SCFD1Q8WVM8 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC26.68■■□□□ 1.86
SCFD1Q8WVM8 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC26.68■■□□□ 1.86
SCFD1Q8WVM8 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC26.68■■□□□ 1.86
SCFD1Q8WVM8 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC26.68■■□□□ 1.86
SCFD1Q8WVM8 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC26.68■■□□□ 1.86
SCFD1Q8WVM8 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
SCFD1Q8WVM8 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC26.67■■□□□ 1.86
SCFD1Q8WVM8 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
SCFD1Q8WVM8 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC26.67■■□□□ 1.86
SCFD1Q8WVM8 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC26.67■■□□□ 1.86
SCFD1Q8WVM8 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
SCFD1Q8WVM8 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
SCFD1Q8WVM8 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC26.66■■□□□ 1.86
SCFD1Q8WVM8 AC096887.2-201ENST00000623443 1957 ntBASIC26.66■■□□□ 1.86
SCFD1Q8WVM8 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC26.66■■□□□ 1.86
SCFD1Q8WVM8 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
SCFD1Q8WVM8 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC26.65■■□□□ 1.86
SCFD1Q8WVM8 AC007029.1-201ENST00000604183 313 ntBASIC26.65■■□□□ 1.86
SCFD1Q8WVM8 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.86
SCFD1Q8WVM8 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC26.64■■□□□ 1.86
SCFD1Q8WVM8 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC26.64■■□□□ 1.86
SCFD1Q8WVM8 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.86
SCFD1Q8WVM8 RNF126P1-201ENST00000567452 1320 ntBASIC26.64■■□□□ 1.85
SCFD1Q8WVM8 RP9P-202ENST00000450133 1212 ntBASIC26.63■■□□□ 1.85
SCFD1Q8WVM8 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC26.63■■□□□ 1.85
SCFD1Q8WVM8 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC26.62■■□□□ 1.85
SCFD1Q8WVM8 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC26.62■■□□□ 1.85
SCFD1Q8WVM8 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC26.62■■□□□ 1.85
SCFD1Q8WVM8 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
SCFD1Q8WVM8 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC26.62■■□□□ 1.85
SCFD1Q8WVM8 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
SCFD1Q8WVM8 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC26.61■■□□□ 1.85
SCFD1Q8WVM8 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
SCFD1Q8WVM8 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC26.61■■□□□ 1.85
SCFD1Q8WVM8 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC26.61■■□□□ 1.85
SCFD1Q8WVM8 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
SCFD1Q8WVM8 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC26.61■■□□□ 1.85
SCFD1Q8WVM8 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC26.61■■□□□ 1.85
SCFD1Q8WVM8 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
SCFD1Q8WVM8 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
SCFD1Q8WVM8 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
SCFD1Q8WVM8 AC093536.1-201ENST00000569153 554 ntBASIC26.6■■□□□ 1.85
SCFD1Q8WVM8 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC26.6■■□□□ 1.85
SCFD1Q8WVM8 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC26.6■■□□□ 1.85
SCFD1Q8WVM8 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC26.6■■□□□ 1.85
SCFD1Q8WVM8 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC26.59■■□□□ 1.85
SCFD1Q8WVM8 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC26.59■■□□□ 1.85
SCFD1Q8WVM8 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
SCFD1Q8WVM8 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC26.59■■□□□ 1.85
SCFD1Q8WVM8 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC26.58■■□□□ 1.85
SCFD1Q8WVM8 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
SCFD1Q8WVM8 HSD17B1P1-201ENST00000590052 955 ntBASIC26.58■■□□□ 1.85
SCFD1Q8WVM8 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC26.57■■□□□ 1.84
SCFD1Q8WVM8 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
SCFD1Q8WVM8 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC26.57■■□□□ 1.84
SCFD1Q8WVM8 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC26.57■■□□□ 1.84
SCFD1Q8WVM8 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
SCFD1Q8WVM8 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
SCFD1Q8WVM8 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC26.56■■□□□ 1.84
SCFD1Q8WVM8 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC26.56■■□□□ 1.84
SCFD1Q8WVM8 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC26.56■■□□□ 1.84
SCFD1Q8WVM8 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC26.56■■□□□ 1.84
SCFD1Q8WVM8 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC26.56■■□□□ 1.84
SCFD1Q8WVM8 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC26.55■■□□□ 1.84
SCFD1Q8WVM8 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC26.55■■□□□ 1.84
SCFD1Q8WVM8 GFER-205ENST00000569451 517 ntTSL 5 BASIC26.55■■□□□ 1.84
SCFD1Q8WVM8 AC020928.2-201ENST00000588717 2197 ntBASIC26.55■■□□□ 1.84
SCFD1Q8WVM8 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
SCFD1Q8WVM8 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
SCFD1Q8WVM8 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC26.54■■□□□ 1.84
SCFD1Q8WVM8 RAP2CP1-202ENST00000605179 643 ntBASIC26.54■■□□□ 1.84
SCFD1Q8WVM8 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC26.54■■□□□ 1.84
SCFD1Q8WVM8 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC26.53■■□□□ 1.84
SCFD1Q8WVM8 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
SCFD1Q8WVM8 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
SCFD1Q8WVM8 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
SCFD1Q8WVM8 AC026202.3-201ENST00000600805 1127 ntBASIC26.53■■□□□ 1.84
SCFD1Q8WVM8 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms