Protein–RNA interactions for Protein: Q8NBP7

PCSK9, Proprotein convertase subtilisin/kexin type 9, humanhuman

Known RBP Predictions only

Length 692 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCSK9Q8NBP7 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC27.16■■□□□ 1.94
PCSK9Q8NBP7 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC27.16■■□□□ 1.94
PCSK9Q8NBP7 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC27.16■■□□□ 1.94
PCSK9Q8NBP7 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC27.15■■□□□ 1.94
PCSK9Q8NBP7 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
PCSK9Q8NBP7 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
PCSK9Q8NBP7 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC27.15■■□□□ 1.94
PCSK9Q8NBP7 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC27.15■■□□□ 1.94
PCSK9Q8NBP7 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC27.15■■□□□ 1.94
PCSK9Q8NBP7 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC27.15■■□□□ 1.94
PCSK9Q8NBP7 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC27.14■■□□□ 1.94
PCSK9Q8NBP7 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC27.14■■□□□ 1.94
PCSK9Q8NBP7 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC27.14■■□□□ 1.94
PCSK9Q8NBP7 MIR4787-201ENST00000607364 84 ntBASIC27.14■■□□□ 1.94
PCSK9Q8NBP7 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC27.14■■□□□ 1.94
PCSK9Q8NBP7 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC27.14■■□□□ 1.94
PCSK9Q8NBP7 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.93
PCSK9Q8NBP7 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC27.14■■□□□ 1.93
PCSK9Q8NBP7 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC27.13■■□□□ 1.93
PCSK9Q8NBP7 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
PCSK9Q8NBP7 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC27.12■■□□□ 1.93
PCSK9Q8NBP7 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC27.12■■□□□ 1.93
PCSK9Q8NBP7 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC27.12■■□□□ 1.93
PCSK9Q8NBP7 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC27.12■■□□□ 1.93
PCSK9Q8NBP7 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC27.12■■□□□ 1.93
PCSK9Q8NBP7 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC27.11■■□□□ 1.93
PCSK9Q8NBP7 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC27.11■■□□□ 1.93
PCSK9Q8NBP7 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC27.11■■□□□ 1.93
PCSK9Q8NBP7 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC27.11■■□□□ 1.93
PCSK9Q8NBP7 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
PCSK9Q8NBP7 KRT18P24-201ENST00000344739 1156 ntBASIC27.1■■□□□ 1.93
PCSK9Q8NBP7 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
PCSK9Q8NBP7 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC27.1■■□□□ 1.93
PCSK9Q8NBP7 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC27.09■■□□□ 1.93
PCSK9Q8NBP7 LSM7-203ENST00000585409 512 ntTSL 2 BASIC27.09■■□□□ 1.93
PCSK9Q8NBP7 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC27.09■■□□□ 1.93
PCSK9Q8NBP7 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC27.09■■□□□ 1.93
PCSK9Q8NBP7 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC27.09■■□□□ 1.93
PCSK9Q8NBP7 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC27.08■■□□□ 1.93
PCSK9Q8NBP7 TPRG1L-202ENST00000378344 2414 ntAPPRIS P1 TSL 2 BASIC27.08■■□□□ 1.93
PCSK9Q8NBP7 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC27.08■■□□□ 1.93
PCSK9Q8NBP7 ABCB10P1-201ENST00000614297 2181 ntBASIC27.08■■□□□ 1.93
PCSK9Q8NBP7 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.93
PCSK9Q8NBP7 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC27.08■■□□□ 1.92
PCSK9Q8NBP7 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC27.07■■□□□ 1.92
PCSK9Q8NBP7 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC27.07■■□□□ 1.92
PCSK9Q8NBP7 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC27.07■■□□□ 1.92
PCSK9Q8NBP7 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC27.07■■□□□ 1.92
PCSK9Q8NBP7 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC27.07■■□□□ 1.92
PCSK9Q8NBP7 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC27.07■■□□□ 1.92
PCSK9Q8NBP7 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC27.06■■□□□ 1.92
PCSK9Q8NBP7 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC27.06■■□□□ 1.92
PCSK9Q8NBP7 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC27.06■■□□□ 1.92
PCSK9Q8NBP7 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC27.05■■□□□ 1.92
PCSK9Q8NBP7 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC27.05■■□□□ 1.92
PCSK9Q8NBP7 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC27.05■■□□□ 1.92
PCSK9Q8NBP7 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC27.05■■□□□ 1.92
PCSK9Q8NBP7 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC27.05■■□□□ 1.92
PCSK9Q8NBP7 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC27.05■■□□□ 1.92
PCSK9Q8NBP7 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC27.05■■□□□ 1.92
PCSK9Q8NBP7 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC27.04■■□□□ 1.92
PCSK9Q8NBP7 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC27.04■■□□□ 1.92
PCSK9Q8NBP7 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC27.04■■□□□ 1.92
PCSK9Q8NBP7 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC27.04■■□□□ 1.92
PCSK9Q8NBP7 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
PCSK9Q8NBP7 KRT16P3-201ENST00000439127 1283 ntBASIC27.03■■□□□ 1.92
PCSK9Q8NBP7 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC27.03■■□□□ 1.92
PCSK9Q8NBP7 UNC93B8-201ENST00000511903 705 ntBASIC27.03■■□□□ 1.92
PCSK9Q8NBP7 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC27.03■■□□□ 1.92
PCSK9Q8NBP7 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
PCSK9Q8NBP7 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
PCSK9Q8NBP7 PEMT-206ENST00000435340 960 ntTSL 5 BASIC27.02■■□□□ 1.92
PCSK9Q8NBP7 AL449106.1-201ENST00000608517 1980 ntBASIC27.02■■□□□ 1.92
PCSK9Q8NBP7 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.91
PCSK9Q8NBP7 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC27.01■■□□□ 1.91
PCSK9Q8NBP7 AC137630.3-201ENST00000607245 391 ntBASIC27.01■■□□□ 1.91
PCSK9Q8NBP7 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC27.01■■□□□ 1.91
PCSK9Q8NBP7 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC27■■□□□ 1.91
PCSK9Q8NBP7 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC27■■□□□ 1.91
PCSK9Q8NBP7 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC27■■□□□ 1.91
PCSK9Q8NBP7 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC27■■□□□ 1.91
PCSK9Q8NBP7 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC26.99■■□□□ 1.91
PCSK9Q8NBP7 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC26.99■■□□□ 1.91
PCSK9Q8NBP7 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC26.99■■□□□ 1.91
PCSK9Q8NBP7 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
PCSK9Q8NBP7 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC26.98■■□□□ 1.91
PCSK9Q8NBP7 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC26.98■■□□□ 1.91
PCSK9Q8NBP7 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC26.98■■□□□ 1.91
PCSK9Q8NBP7 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC26.97■■□□□ 1.91
PCSK9Q8NBP7 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC26.97■■□□□ 1.91
PCSK9Q8NBP7 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC26.97■■□□□ 1.91
PCSK9Q8NBP7 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC26.96■■□□□ 1.91
PCSK9Q8NBP7 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC26.96■■□□□ 1.91
PCSK9Q8NBP7 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC26.96■■□□□ 1.91
PCSK9Q8NBP7 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC26.96■■□□□ 1.91
PCSK9Q8NBP7 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC26.96■■□□□ 1.91
PCSK9Q8NBP7 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
PCSK9Q8NBP7 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC26.96■■□□□ 1.91
PCSK9Q8NBP7 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC26.96■■□□□ 1.91
PCSK9Q8NBP7 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.91
Retrieved 100 of 98,524 protein–RNA pairs in 18.2 ms