Protein–RNA interactions for Protein: Q8N967

LRTM2, Leucine-rich repeat and transmembrane domain-containing protein 2, humanhuman

Predictions only

Length 370 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM2Q8N967 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
LRTM2Q8N967 DUX4L28-201ENST00000623687 678 ntBASIC19.76■□□□□ 0.75
LRTM2Q8N967 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
LRTM2Q8N967 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC19.76■□□□□ 0.75
LRTM2Q8N967 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
LRTM2Q8N967 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
LRTM2Q8N967 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
LRTM2Q8N967 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
LRTM2Q8N967 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
LRTM2Q8N967 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
LRTM2Q8N967 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
LRTM2Q8N967 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
LRTM2Q8N967 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
LRTM2Q8N967 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
LRTM2Q8N967 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC19.74■□□□□ 0.75
LRTM2Q8N967 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC19.74■□□□□ 0.75
LRTM2Q8N967 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
LRTM2Q8N967 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC19.74■□□□□ 0.75
LRTM2Q8N967 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC19.73■□□□□ 0.75
LRTM2Q8N967 LINC01124-201ENST00000409786 2117 ntBASIC19.73■□□□□ 0.75
LRTM2Q8N967 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC19.73■□□□□ 0.75
LRTM2Q8N967 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
LRTM2Q8N967 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC19.73■□□□□ 0.75
LRTM2Q8N967 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
LRTM2Q8N967 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC19.73■□□□□ 0.75
LRTM2Q8N967 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
LRTM2Q8N967 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
LRTM2Q8N967 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC19.73■□□□□ 0.75
LRTM2Q8N967 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
LRTM2Q8N967 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC19.72■□□□□ 0.75
LRTM2Q8N967 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
LRTM2Q8N967 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
LRTM2Q8N967 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
LRTM2Q8N967 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC19.72■□□□□ 0.75
LRTM2Q8N967 CIB2-204ENST00000557846 934 ntTSL 3 BASIC19.72■□□□□ 0.75
LRTM2Q8N967 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC19.72■□□□□ 0.75
LRTM2Q8N967 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC19.72■□□□□ 0.75
LRTM2Q8N967 AC133561.1-201ENST00000568600 2415 ntBASIC19.72■□□□□ 0.75
LRTM2Q8N967 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
LRTM2Q8N967 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
LRTM2Q8N967 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
LRTM2Q8N967 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
LRTM2Q8N967 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
LRTM2Q8N967 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
LRTM2Q8N967 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
LRTM2Q8N967 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
LRTM2Q8N967 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC19.71■□□□□ 0.75
LRTM2Q8N967 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
LRTM2Q8N967 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
LRTM2Q8N967 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC19.7■□□□□ 0.74
LRTM2Q8N967 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC19.7■□□□□ 0.74
LRTM2Q8N967 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC19.7■□□□□ 0.74
LRTM2Q8N967 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
LRTM2Q8N967 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC19.7■□□□□ 0.74
LRTM2Q8N967 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
LRTM2Q8N967 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
LRTM2Q8N967 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
LRTM2Q8N967 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
LRTM2Q8N967 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC19.69■□□□□ 0.74
LRTM2Q8N967 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
LRTM2Q8N967 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
LRTM2Q8N967 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
LRTM2Q8N967 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
LRTM2Q8N967 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC19.69■□□□□ 0.74
LRTM2Q8N967 AC097639.1-201ENST00000565519 1891 ntBASIC19.69■□□□□ 0.74
LRTM2Q8N967 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
LRTM2Q8N967 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
LRTM2Q8N967 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
LRTM2Q8N967 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
LRTM2Q8N967 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC19.68■□□□□ 0.74
LRTM2Q8N967 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
LRTM2Q8N967 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
LRTM2Q8N967 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
LRTM2Q8N967 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
LRTM2Q8N967 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
LRTM2Q8N967 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
LRTM2Q8N967 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
LRTM2Q8N967 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC19.68■□□□□ 0.74
LRTM2Q8N967 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
LRTM2Q8N967 LINC00543-201ENST00000567234 1845 ntBASIC19.67■□□□□ 0.74
LRTM2Q8N967 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
LRTM2Q8N967 MIR3665-201ENST00000578708 105 ntBASIC19.67■□□□□ 0.74
LRTM2Q8N967 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC19.67■□□□□ 0.74
LRTM2Q8N967 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC19.67■□□□□ 0.74
LRTM2Q8N967 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
LRTM2Q8N967 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
LRTM2Q8N967 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC19.66■□□□□ 0.74
LRTM2Q8N967 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
LRTM2Q8N967 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
LRTM2Q8N967 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
LRTM2Q8N967 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC19.66■□□□□ 0.74
LRTM2Q8N967 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
LRTM2Q8N967 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC19.66■□□□□ 0.74
LRTM2Q8N967 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC19.66■□□□□ 0.74
LRTM2Q8N967 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
LRTM2Q8N967 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
LRTM2Q8N967 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC19.65■□□□□ 0.74
LRTM2Q8N967 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC19.65■□□□□ 0.74
LRTM2Q8N967 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
LRTM2Q8N967 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms