Protein–RNA interactions for Protein: Q8N8D7

NKAIN3, Sodium/potassium-transporting ATPase subunit beta-1-interacting protein 3, humanhuman

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKAIN3Q8N8D7 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
NKAIN3Q8N8D7 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
NKAIN3Q8N8D7 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
NKAIN3Q8N8D7 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
NKAIN3Q8N8D7 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
NKAIN3Q8N8D7 CHST11-202ENST00000546689 756 ntTSL 2 BASIC20.79■□□□□ 0.92
NKAIN3Q8N8D7 DUX4L13-201ENST00000554103 1267 ntBASIC20.79■□□□□ 0.92
NKAIN3Q8N8D7 DUX4L15-201ENST00000611059 1267 ntBASIC20.79■□□□□ 0.92
NKAIN3Q8N8D7 DUX4L23-201ENST00000615195 1269 ntBASIC20.79■□□□□ 0.92
NKAIN3Q8N8D7 DUX4L24-201ENST00000617576 1269 ntBASIC20.79■□□□□ 0.92
NKAIN3Q8N8D7 DUX4L22-201ENST00000618238 1269 ntBASIC20.79■□□□□ 0.92
NKAIN3Q8N8D7 DUX4L20-201ENST00000619712 1269 ntBASIC20.79■□□□□ 0.92
NKAIN3Q8N8D7 DUX4L21-201ENST00000622058 1269 ntBASIC20.79■□□□□ 0.92
NKAIN3Q8N8D7 DUX4L10-201ENST00000622460 1267 ntBASIC20.79■□□□□ 0.92
NKAIN3Q8N8D7 DUX4L25-201ENST00000624915 1269 ntBASIC20.79■□□□□ 0.92
NKAIN3Q8N8D7 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
NKAIN3Q8N8D7 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
NKAIN3Q8N8D7 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
NKAIN3Q8N8D7 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC20.78■□□□□ 0.92
NKAIN3Q8N8D7 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
NKAIN3Q8N8D7 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
NKAIN3Q8N8D7 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
NKAIN3Q8N8D7 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
NKAIN3Q8N8D7 THRA-202ENST00000394121 2260 ntTSL 2 BASIC20.78■□□□□ 0.92
NKAIN3Q8N8D7 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC20.77■□□□□ 0.92
NKAIN3Q8N8D7 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC20.77■□□□□ 0.92
NKAIN3Q8N8D7 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
NKAIN3Q8N8D7 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
NKAIN3Q8N8D7 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC20.77■□□□□ 0.92
NKAIN3Q8N8D7 PREB-202ENST00000406567 1910 ntTSL 5 BASIC20.76■□□□□ 0.91
NKAIN3Q8N8D7 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
NKAIN3Q8N8D7 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC20.76■□□□□ 0.91
NKAIN3Q8N8D7 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
NKAIN3Q8N8D7 HGH1-207ENST00000628266 258 ntTSL 5 BASIC20.76■□□□□ 0.91
NKAIN3Q8N8D7 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC20.76■□□□□ 0.91
NKAIN3Q8N8D7 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC20.76■□□□□ 0.91
NKAIN3Q8N8D7 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC20.76■□□□□ 0.91
NKAIN3Q8N8D7 AL359258.2-201ENST00000564063 1566 ntBASIC20.76■□□□□ 0.91
NKAIN3Q8N8D7 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC20.75■□□□□ 0.91
NKAIN3Q8N8D7 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
NKAIN3Q8N8D7 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
NKAIN3Q8N8D7 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC20.75■□□□□ 0.91
NKAIN3Q8N8D7 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
NKAIN3Q8N8D7 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
NKAIN3Q8N8D7 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
NKAIN3Q8N8D7 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
NKAIN3Q8N8D7 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
NKAIN3Q8N8D7 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
NKAIN3Q8N8D7 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
NKAIN3Q8N8D7 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC20.74■□□□□ 0.91
NKAIN3Q8N8D7 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
NKAIN3Q8N8D7 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC20.74■□□□□ 0.91
NKAIN3Q8N8D7 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
NKAIN3Q8N8D7 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
NKAIN3Q8N8D7 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
NKAIN3Q8N8D7 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
NKAIN3Q8N8D7 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
NKAIN3Q8N8D7 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
NKAIN3Q8N8D7 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
NKAIN3Q8N8D7 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
NKAIN3Q8N8D7 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
NKAIN3Q8N8D7 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
NKAIN3Q8N8D7 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
NKAIN3Q8N8D7 AL359504.2-201ENST00000605506 1601 ntBASIC20.73■□□□□ 0.91
NKAIN3Q8N8D7 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
NKAIN3Q8N8D7 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
NKAIN3Q8N8D7 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
NKAIN3Q8N8D7 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
NKAIN3Q8N8D7 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC20.72■□□□□ 0.91
NKAIN3Q8N8D7 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
NKAIN3Q8N8D7 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
NKAIN3Q8N8D7 CHST11-203ENST00000547956 936 ntTSL 2 BASIC20.72■□□□□ 0.91
NKAIN3Q8N8D7 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
NKAIN3Q8N8D7 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
NKAIN3Q8N8D7 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
NKAIN3Q8N8D7 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
NKAIN3Q8N8D7 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
NKAIN3Q8N8D7 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC20.72■□□□□ 0.91
NKAIN3Q8N8D7 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC20.72■□□□□ 0.91
NKAIN3Q8N8D7 RARA-203ENST00000394086 2008 ntTSL 2 BASIC20.71■□□□□ 0.91
NKAIN3Q8N8D7 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
NKAIN3Q8N8D7 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC20.71■□□□□ 0.91
NKAIN3Q8N8D7 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC20.71■□□□□ 0.91
NKAIN3Q8N8D7 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
NKAIN3Q8N8D7 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC20.71■□□□□ 0.91
NKAIN3Q8N8D7 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC20.71■□□□□ 0.91
NKAIN3Q8N8D7 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
NKAIN3Q8N8D7 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
NKAIN3Q8N8D7 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC20.71■□□□□ 0.91
NKAIN3Q8N8D7 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
NKAIN3Q8N8D7 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC20.7■□□□□ 0.9
NKAIN3Q8N8D7 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC20.7■□□□□ 0.9
NKAIN3Q8N8D7 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
NKAIN3Q8N8D7 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
NKAIN3Q8N8D7 AP003733.4-201ENST00000623785 1697 ntBASIC20.7■□□□□ 0.9
NKAIN3Q8N8D7 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
NKAIN3Q8N8D7 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC20.7■□□□□ 0.9
NKAIN3Q8N8D7 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC20.7■□□□□ 0.9
NKAIN3Q8N8D7 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
NKAIN3Q8N8D7 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms