Protein–RNA interactions for Protein: Q8N3V7

SYNPO, Synaptopodin, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPOQ8N3V7 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
SYNPOQ8N3V7 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC24.8■■□□□ 1.56
SYNPOQ8N3V7 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
SYNPOQ8N3V7 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC24.79■■□□□ 1.56
SYNPOQ8N3V7 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC24.79■■□□□ 1.56
SYNPOQ8N3V7 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC24.79■■□□□ 1.56
SYNPOQ8N3V7 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
SYNPOQ8N3V7 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
SYNPOQ8N3V7 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
SYNPOQ8N3V7 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC24.78■■□□□ 1.56
SYNPOQ8N3V7 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
SYNPOQ8N3V7 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC24.78■■□□□ 1.56
SYNPOQ8N3V7 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
SYNPOQ8N3V7 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
SYNPOQ8N3V7 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC24.77■■□□□ 1.56
SYNPOQ8N3V7 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
SYNPOQ8N3V7 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC24.77■■□□□ 1.56
SYNPOQ8N3V7 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC24.77■■□□□ 1.56
SYNPOQ8N3V7 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
SYNPOQ8N3V7 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
SYNPOQ8N3V7 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
SYNPOQ8N3V7 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC24.76■■□□□ 1.55
SYNPOQ8N3V7 AC022616.5-201ENST00000518796 181 ntBASIC24.76■■□□□ 1.55
SYNPOQ8N3V7 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC24.76■■□□□ 1.55
SYNPOQ8N3V7 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
SYNPOQ8N3V7 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
SYNPOQ8N3V7 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC24.75■■□□□ 1.55
SYNPOQ8N3V7 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC24.75■■□□□ 1.55
SYNPOQ8N3V7 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC24.75■■□□□ 1.55
SYNPOQ8N3V7 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC24.75■■□□□ 1.55
SYNPOQ8N3V7 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC24.75■■□□□ 1.55
SYNPOQ8N3V7 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC24.74■■□□□ 1.55
SYNPOQ8N3V7 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC24.74■■□□□ 1.55
SYNPOQ8N3V7 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC24.74■■□□□ 1.55
SYNPOQ8N3V7 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
SYNPOQ8N3V7 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
SYNPOQ8N3V7 PROC-203ENST00000409048 1586 ntTSL 5 BASIC24.73■■□□□ 1.55
SYNPOQ8N3V7 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC24.73■■□□□ 1.55
SYNPOQ8N3V7 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
SYNPOQ8N3V7 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
SYNPOQ8N3V7 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC24.72■■□□□ 1.55
SYNPOQ8N3V7 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
SYNPOQ8N3V7 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
SYNPOQ8N3V7 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
SYNPOQ8N3V7 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC24.71■■□□□ 1.55
SYNPOQ8N3V7 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
SYNPOQ8N3V7 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC24.71■■□□□ 1.55
SYNPOQ8N3V7 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC24.71■■□□□ 1.55
SYNPOQ8N3V7 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC24.71■■□□□ 1.55
SYNPOQ8N3V7 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC24.71■■□□□ 1.55
SYNPOQ8N3V7 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC24.7■■□□□ 1.54
SYNPOQ8N3V7 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC24.7■■□□□ 1.54
SYNPOQ8N3V7 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
SYNPOQ8N3V7 CREM-229ENST00000474362 1030 ntTSL 2 BASIC24.7■■□□□ 1.54
SYNPOQ8N3V7 KRT125P-201ENST00000546827 989 ntBASIC24.7■■□□□ 1.54
SYNPOQ8N3V7 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC24.7■■□□□ 1.54
SYNPOQ8N3V7 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC24.7■■□□□ 1.54
SYNPOQ8N3V7 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC24.7■■□□□ 1.54
SYNPOQ8N3V7 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC24.7■■□□□ 1.54
SYNPOQ8N3V7 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
SYNPOQ8N3V7 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
SYNPOQ8N3V7 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC24.69■■□□□ 1.54
SYNPOQ8N3V7 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
SYNPOQ8N3V7 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
SYNPOQ8N3V7 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
SYNPOQ8N3V7 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
SYNPOQ8N3V7 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC24.68■■□□□ 1.54
SYNPOQ8N3V7 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
SYNPOQ8N3V7 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
SYNPOQ8N3V7 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC24.67■■□□□ 1.54
SYNPOQ8N3V7 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
SYNPOQ8N3V7 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
SYNPOQ8N3V7 BX664725.1-201ENST00000438252 379 ntBASIC24.67■■□□□ 1.54
SYNPOQ8N3V7 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC24.67■■□□□ 1.54
SYNPOQ8N3V7 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
SYNPOQ8N3V7 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
SYNPOQ8N3V7 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
SYNPOQ8N3V7 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
SYNPOQ8N3V7 AC008406.3-201ENST00000620001 1374 ntBASIC24.67■■□□□ 1.54
SYNPOQ8N3V7 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
SYNPOQ8N3V7 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
SYNPOQ8N3V7 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
SYNPOQ8N3V7 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
SYNPOQ8N3V7 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
SYNPOQ8N3V7 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
SYNPOQ8N3V7 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
SYNPOQ8N3V7 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
SYNPOQ8N3V7 AC142086.6-201ENST00000621154 1765 ntBASIC24.65■■□□□ 1.54
SYNPOQ8N3V7 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC24.65■■□□□ 1.54
SYNPOQ8N3V7 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC24.65■■□□□ 1.54
SYNPOQ8N3V7 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC24.65■■□□□ 1.54
SYNPOQ8N3V7 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC24.65■■□□□ 1.54
SYNPOQ8N3V7 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC24.65■■□□□ 1.54
SYNPOQ8N3V7 GRAMD4P7-201ENST00000578182 1232 ntBASIC24.65■■□□□ 1.54
SYNPOQ8N3V7 MIR4787-201ENST00000607364 84 ntBASIC24.64■■□□□ 1.54
SYNPOQ8N3V7 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC24.64■■□□□ 1.53
SYNPOQ8N3V7 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC24.64■■□□□ 1.53
SYNPOQ8N3V7 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
SYNPOQ8N3V7 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
SYNPOQ8N3V7 KRT18P24-201ENST00000344739 1156 ntBASIC24.63■■□□□ 1.53
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms