Protein–RNA interactions for Protein: Q8N1N4

KRT78, Keratin, type II cytoskeletal 78, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT78Q8N1N4 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
KRT78Q8N1N4 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC23.3■■□□□ 1.32
KRT78Q8N1N4 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
KRT78Q8N1N4 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC23.29■■□□□ 1.32
KRT78Q8N1N4 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
KRT78Q8N1N4 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
KRT78Q8N1N4 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
KRT78Q8N1N4 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
KRT78Q8N1N4 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
KRT78Q8N1N4 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
KRT78Q8N1N4 RP9P-202ENST00000450133 1212 ntBASIC23.28■■□□□ 1.32
KRT78Q8N1N4 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
KRT78Q8N1N4 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC23.28■■□□□ 1.32
KRT78Q8N1N4 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
KRT78Q8N1N4 RNF126P1-201ENST00000567452 1320 ntBASIC23.28■■□□□ 1.32
KRT78Q8N1N4 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
KRT78Q8N1N4 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC23.28■■□□□ 1.32
KRT78Q8N1N4 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
KRT78Q8N1N4 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
KRT78Q8N1N4 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC23.27■■□□□ 1.32
KRT78Q8N1N4 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
KRT78Q8N1N4 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC23.27■■□□□ 1.32
KRT78Q8N1N4 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
KRT78Q8N1N4 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
KRT78Q8N1N4 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC23.27■■□□□ 1.32
KRT78Q8N1N4 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC23.27■■□□□ 1.32
KRT78Q8N1N4 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
KRT78Q8N1N4 SHF-207ENST00000560540 2062 ntTSL 5 BASIC23.27■■□□□ 1.32
KRT78Q8N1N4 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
KRT78Q8N1N4 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC23.27■■□□□ 1.32
KRT78Q8N1N4 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC23.27■■□□□ 1.32
KRT78Q8N1N4 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC23.27■■□□□ 1.32
KRT78Q8N1N4 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
KRT78Q8N1N4 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC23.26■■□□□ 1.31
KRT78Q8N1N4 AC007029.1-201ENST00000604183 313 ntBASIC23.26■■□□□ 1.31
KRT78Q8N1N4 AC010501.1-201ENST00000606270 1962 ntBASIC23.26■■□□□ 1.31
KRT78Q8N1N4 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
KRT78Q8N1N4 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC23.25■■□□□ 1.31
KRT78Q8N1N4 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC23.25■■□□□ 1.31
KRT78Q8N1N4 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC23.25■■□□□ 1.31
KRT78Q8N1N4 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
KRT78Q8N1N4 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
KRT78Q8N1N4 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC23.25■■□□□ 1.31
KRT78Q8N1N4 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC23.25■■□□□ 1.31
KRT78Q8N1N4 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC23.25■■□□□ 1.31
KRT78Q8N1N4 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC23.25■■□□□ 1.31
KRT78Q8N1N4 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC23.24■■□□□ 1.31
KRT78Q8N1N4 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
KRT78Q8N1N4 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
KRT78Q8N1N4 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
KRT78Q8N1N4 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
KRT78Q8N1N4 ERN1-208ENST00000606895 2068 ntBASIC23.24■■□□□ 1.31
KRT78Q8N1N4 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC23.24■■□□□ 1.31
KRT78Q8N1N4 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
KRT78Q8N1N4 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
KRT78Q8N1N4 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC23.23■■□□□ 1.31
KRT78Q8N1N4 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
KRT78Q8N1N4 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC23.23■■□□□ 1.31
KRT78Q8N1N4 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC23.23■■□□□ 1.31
KRT78Q8N1N4 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC23.23■■□□□ 1.31
KRT78Q8N1N4 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
KRT78Q8N1N4 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
KRT78Q8N1N4 AC093536.1-201ENST00000569153 554 ntBASIC23.22■■□□□ 1.31
KRT78Q8N1N4 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
KRT78Q8N1N4 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
KRT78Q8N1N4 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC23.22■■□□□ 1.31
KRT78Q8N1N4 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
KRT78Q8N1N4 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
KRT78Q8N1N4 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC23.22■■□□□ 1.31
KRT78Q8N1N4 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
KRT78Q8N1N4 GFER-205ENST00000569451 517 ntTSL 5 BASIC23.21■■□□□ 1.31
KRT78Q8N1N4 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
KRT78Q8N1N4 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
KRT78Q8N1N4 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
KRT78Q8N1N4 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
KRT78Q8N1N4 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
KRT78Q8N1N4 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC23.2■■□□□ 1.3
KRT78Q8N1N4 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
KRT78Q8N1N4 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC23.2■■□□□ 1.3
KRT78Q8N1N4 HSD17B1P1-201ENST00000590052 955 ntBASIC23.2■■□□□ 1.3
KRT78Q8N1N4 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC23.19■■□□□ 1.3
KRT78Q8N1N4 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
KRT78Q8N1N4 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC23.19■■□□□ 1.3
KRT78Q8N1N4 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC23.19■■□□□ 1.3
KRT78Q8N1N4 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC23.19■■□□□ 1.3
KRT78Q8N1N4 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC23.19■■□□□ 1.3
KRT78Q8N1N4 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
KRT78Q8N1N4 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
KRT78Q8N1N4 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC23.18■■□□□ 1.3
KRT78Q8N1N4 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC23.18■■□□□ 1.3
KRT78Q8N1N4 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
KRT78Q8N1N4 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC23.17■■□□□ 1.3
KRT78Q8N1N4 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
KRT78Q8N1N4 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC23.17■■□□□ 1.3
KRT78Q8N1N4 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
KRT78Q8N1N4 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
KRT78Q8N1N4 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
KRT78Q8N1N4 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC23.17■■□□□ 1.3
KRT78Q8N1N4 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC23.16■■□□□ 1.3
KRT78Q8N1N4 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC23.16■■□□□ 1.3
Retrieved 100 of 98,524 protein–RNA pairs in 43.3 ms