Protein–RNA interactions for Protein: Q8IYI8

ZNF440, Zinc finger protein 440, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF440Q8IYI8 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC22.14■■□□□ 1.14
ZNF440Q8IYI8 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC22.14■■□□□ 1.13
ZNF440Q8IYI8 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC22.14■■□□□ 1.13
ZNF440Q8IYI8 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
ZNF440Q8IYI8 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
ZNF440Q8IYI8 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
ZNF440Q8IYI8 ERN1-208ENST00000606895 2068 ntBASIC22.13■■□□□ 1.13
ZNF440Q8IYI8 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC22.13■■□□□ 1.13
ZNF440Q8IYI8 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
ZNF440Q8IYI8 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
ZNF440Q8IYI8 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC22.13■■□□□ 1.13
ZNF440Q8IYI8 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
ZNF440Q8IYI8 HES4-202ENST00000428771 1040 ntTSL 2 BASIC22.13■■□□□ 1.13
ZNF440Q8IYI8 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC22.13■■□□□ 1.13
ZNF440Q8IYI8 CEP120-209ENST00000515110 606 ntTSL 3 BASIC22.13■■□□□ 1.13
ZNF440Q8IYI8 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC22.13■■□□□ 1.13
ZNF440Q8IYI8 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
ZNF440Q8IYI8 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
ZNF440Q8IYI8 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC22.13■■□□□ 1.13
ZNF440Q8IYI8 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
ZNF440Q8IYI8 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
ZNF440Q8IYI8 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC22.11■■□□□ 1.13
ZNF440Q8IYI8 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC22.11■■□□□ 1.13
ZNF440Q8IYI8 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
ZNF440Q8IYI8 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC22.11■■□□□ 1.13
ZNF440Q8IYI8 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC22.11■■□□□ 1.13
ZNF440Q8IYI8 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC22.1■■□□□ 1.13
ZNF440Q8IYI8 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC22.09■■□□□ 1.13
ZNF440Q8IYI8 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC22.09■■□□□ 1.13
ZNF440Q8IYI8 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
ZNF440Q8IYI8 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
ZNF440Q8IYI8 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC22.08■■□□□ 1.13
ZNF440Q8IYI8 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC22.08■■□□□ 1.13
ZNF440Q8IYI8 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC22.08■■□□□ 1.13
ZNF440Q8IYI8 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
ZNF440Q8IYI8 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC22.08■■□□□ 1.13
ZNF440Q8IYI8 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
ZNF440Q8IYI8 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC22.08■■□□□ 1.13
ZNF440Q8IYI8 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC22.08■■□□□ 1.13
ZNF440Q8IYI8 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC22.08■■□□□ 1.13
ZNF440Q8IYI8 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC22.08■■□□□ 1.13
ZNF440Q8IYI8 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC22.08■■□□□ 1.12
ZNF440Q8IYI8 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC22.07■■□□□ 1.12
ZNF440Q8IYI8 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC22.07■■□□□ 1.12
ZNF440Q8IYI8 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC22.07■■□□□ 1.12
ZNF440Q8IYI8 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC22.07■■□□□ 1.12
ZNF440Q8IYI8 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC22.07■■□□□ 1.12
ZNF440Q8IYI8 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC22.07■■□□□ 1.12
ZNF440Q8IYI8 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC22.07■■□□□ 1.12
ZNF440Q8IYI8 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC22.07■■□□□ 1.12
ZNF440Q8IYI8 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC22.06■■□□□ 1.12
ZNF440Q8IYI8 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
ZNF440Q8IYI8 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
ZNF440Q8IYI8 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
ZNF440Q8IYI8 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC22.06■■□□□ 1.12
ZNF440Q8IYI8 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC22.06■■□□□ 1.12
ZNF440Q8IYI8 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
ZNF440Q8IYI8 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC22.05■■□□□ 1.12
ZNF440Q8IYI8 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC22.05■■□□□ 1.12
ZNF440Q8IYI8 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC22.05■■□□□ 1.12
ZNF440Q8IYI8 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC22.04■■□□□ 1.12
ZNF440Q8IYI8 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC22.04■■□□□ 1.12
ZNF440Q8IYI8 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
ZNF440Q8IYI8 GPX1-201ENST00000419349 1106 ntBASIC22.04■■□□□ 1.12
ZNF440Q8IYI8 RP9P-202ENST00000450133 1212 ntBASIC22.04■■□□□ 1.12
ZNF440Q8IYI8 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
ZNF440Q8IYI8 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
ZNF440Q8IYI8 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
ZNF440Q8IYI8 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
ZNF440Q8IYI8 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC22.02■■□□□ 1.12
ZNF440Q8IYI8 AC096887.2-201ENST00000623443 1957 ntBASIC22.02■■□□□ 1.12
ZNF440Q8IYI8 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
ZNF440Q8IYI8 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
ZNF440Q8IYI8 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
ZNF440Q8IYI8 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
ZNF440Q8IYI8 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
ZNF440Q8IYI8 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC22.01■■□□□ 1.11
ZNF440Q8IYI8 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC22.01■■□□□ 1.11
ZNF440Q8IYI8 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC22.01■■□□□ 1.11
ZNF440Q8IYI8 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
ZNF440Q8IYI8 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC22■■□□□ 1.11
ZNF440Q8IYI8 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
ZNF440Q8IYI8 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC22■■□□□ 1.11
ZNF440Q8IYI8 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC22■■□□□ 1.11
ZNF440Q8IYI8 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC22■■□□□ 1.11
ZNF440Q8IYI8 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC22■■□□□ 1.11
ZNF440Q8IYI8 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC22■■□□□ 1.11
ZNF440Q8IYI8 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC21.99■■□□□ 1.11
ZNF440Q8IYI8 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
ZNF440Q8IYI8 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
ZNF440Q8IYI8 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC21.99■■□□□ 1.11
ZNF440Q8IYI8 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC21.99■■□□□ 1.11
ZNF440Q8IYI8 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC21.99■■□□□ 1.11
ZNF440Q8IYI8 AC007029.1-201ENST00000604183 313 ntBASIC21.99■■□□□ 1.11
ZNF440Q8IYI8 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
ZNF440Q8IYI8 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC21.99■■□□□ 1.11
ZNF440Q8IYI8 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC21.99■■□□□ 1.11
ZNF440Q8IYI8 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC21.99■■□□□ 1.11
ZNF440Q8IYI8 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
ZNF440Q8IYI8 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms