Protein–RNA interactions for Protein: Q86WJ1

CHD1L, Chromodomain-helicase-DNA-binding protein 1-like, humanhuman

Predictions only

Length 897 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1LQ86WJ1 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC30■■■□□ 2.39
CHD1LQ86WJ1 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC30■■■□□ 2.39
CHD1LQ86WJ1 CEBPA-AS1-201ENST00000592982 2198 ntBASIC30■■■□□ 2.39
CHD1LQ86WJ1 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC29.99■■■□□ 2.39
CHD1LQ86WJ1 AC060814.1-201ENST00000554326 538 ntBASIC29.99■■■□□ 2.39
CHD1LQ86WJ1 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC29.98■■■□□ 2.39
CHD1LQ86WJ1 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC29.98■■■□□ 2.39
CHD1LQ86WJ1 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC29.98■■■□□ 2.39
CHD1LQ86WJ1 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC29.98■■■□□ 2.39
CHD1LQ86WJ1 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC29.98■■■□□ 2.39
CHD1LQ86WJ1 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC29.97■■■□□ 2.39
CHD1LQ86WJ1 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC29.97■■■□□ 2.39
CHD1LQ86WJ1 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC29.97■■■□□ 2.39
CHD1LQ86WJ1 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC29.96■■■□□ 2.39
CHD1LQ86WJ1 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC29.96■■■□□ 2.39
CHD1LQ86WJ1 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC29.96■■■□□ 2.39
CHD1LQ86WJ1 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC29.96■■■□□ 2.39
CHD1LQ86WJ1 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC29.96■■■□□ 2.39
CHD1LQ86WJ1 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC29.96■■■□□ 2.39
CHD1LQ86WJ1 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC29.96■■■□□ 2.39
CHD1LQ86WJ1 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC29.96■■■□□ 2.39
CHD1LQ86WJ1 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC29.96■■■□□ 2.39
CHD1LQ86WJ1 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC29.96■■■□□ 2.39
CHD1LQ86WJ1 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC29.96■■■□□ 2.39
CHD1LQ86WJ1 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC29.95■■■□□ 2.39
CHD1LQ86WJ1 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC29.95■■■□□ 2.39
CHD1LQ86WJ1 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC29.95■■■□□ 2.39
CHD1LQ86WJ1 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC29.95■■■□□ 2.39
CHD1LQ86WJ1 MOB2-207ENST00000614710 705 ntTSL 5 BASIC29.95■■■□□ 2.39
CHD1LQ86WJ1 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC29.95■■■□□ 2.38
CHD1LQ86WJ1 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC29.95■■■□□ 2.38
CHD1LQ86WJ1 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC29.94■■■□□ 2.38
CHD1LQ86WJ1 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC29.94■■■□□ 2.38
CHD1LQ86WJ1 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC29.94■■■□□ 2.38
CHD1LQ86WJ1 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC29.94■■■□□ 2.38
CHD1LQ86WJ1 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC29.94■■■□□ 2.38
CHD1LQ86WJ1 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC29.94■■■□□ 2.38
CHD1LQ86WJ1 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC29.93■■■□□ 2.38
CHD1LQ86WJ1 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC29.93■■■□□ 2.38
CHD1LQ86WJ1 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC29.93■■■□□ 2.38
CHD1LQ86WJ1 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC29.93■■■□□ 2.38
CHD1LQ86WJ1 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC29.92■■■□□ 2.38
CHD1LQ86WJ1 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC29.92■■■□□ 2.38
CHD1LQ86WJ1 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC29.92■■■□□ 2.38
CHD1LQ86WJ1 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC29.91■■■□□ 2.38
CHD1LQ86WJ1 AC025884.2-201ENST00000553429 711 ntBASIC29.91■■■□□ 2.38
CHD1LQ86WJ1 SRP68-213ENST00000629930 165 ntTSL 5 BASIC29.91■■■□□ 2.38
CHD1LQ86WJ1 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC29.91■■■□□ 2.38
CHD1LQ86WJ1 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC29.9■■■□□ 2.38
CHD1LQ86WJ1 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC29.9■■■□□ 2.38
CHD1LQ86WJ1 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC29.9■■■□□ 2.38
CHD1LQ86WJ1 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC29.9■■■□□ 2.38
CHD1LQ86WJ1 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC29.9■■■□□ 2.38
CHD1LQ86WJ1 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC29.89■■■□□ 2.38
CHD1LQ86WJ1 TPT1-202ENST00000379055 948 ntTSL 2 BASIC29.89■■■□□ 2.38
CHD1LQ86WJ1 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC29.89■■■□□ 2.38
CHD1LQ86WJ1 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC29.89■■■□□ 2.38
CHD1LQ86WJ1 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC29.89■■■□□ 2.37
CHD1LQ86WJ1 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC29.89■■■□□ 2.37
CHD1LQ86WJ1 AC092296.2-201ENST00000589470 999 ntBASIC29.88■■■□□ 2.37
CHD1LQ86WJ1 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC29.88■■■□□ 2.37
CHD1LQ86WJ1 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC29.88■■■□□ 2.37
CHD1LQ86WJ1 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC29.87■■■□□ 2.37
CHD1LQ86WJ1 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC29.87■■■□□ 2.37
CHD1LQ86WJ1 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC29.87■■■□□ 2.37
CHD1LQ86WJ1 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC29.87■■■□□ 2.37
CHD1LQ86WJ1 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC29.87■■■□□ 2.37
CHD1LQ86WJ1 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC29.87■■■□□ 2.37
CHD1LQ86WJ1 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC29.87■■■□□ 2.37
CHD1LQ86WJ1 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC29.87■■■□□ 2.37
CHD1LQ86WJ1 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC29.87■■■□□ 2.37
CHD1LQ86WJ1 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC29.86■■■□□ 2.37
CHD1LQ86WJ1 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC29.86■■■□□ 2.37
CHD1LQ86WJ1 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC29.86■■■□□ 2.37
CHD1LQ86WJ1 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC29.86■■■□□ 2.37
CHD1LQ86WJ1 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC29.86■■■□□ 2.37
CHD1LQ86WJ1 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC29.86■■■□□ 2.37
CHD1LQ86WJ1 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC29.86■■■□□ 2.37
CHD1LQ86WJ1 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC29.85■■■□□ 2.37
CHD1LQ86WJ1 PFN2-211ENST00000489155 636 ntTSL 4 BASIC29.85■■■□□ 2.37
CHD1LQ86WJ1 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC29.85■■■□□ 2.37
CHD1LQ86WJ1 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC29.85■■■□□ 2.37
CHD1LQ86WJ1 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC29.85■■■□□ 2.37
CHD1LQ86WJ1 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC29.85■■■□□ 2.37
CHD1LQ86WJ1 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC29.84■■■□□ 2.37
CHD1LQ86WJ1 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC29.84■■■□□ 2.37
CHD1LQ86WJ1 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC29.84■■■□□ 2.37
CHD1LQ86WJ1 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC29.84■■■□□ 2.37
CHD1LQ86WJ1 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC29.83■■■□□ 2.37
CHD1LQ86WJ1 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC29.82■■■□□ 2.36
CHD1LQ86WJ1 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC29.82■■■□□ 2.36
CHD1LQ86WJ1 SMPD5-203ENST00000639008 1464 ntBASIC29.81■■■□□ 2.36
CHD1LQ86WJ1 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC29.81■■■□□ 2.36
CHD1LQ86WJ1 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC29.81■■■□□ 2.36
CHD1LQ86WJ1 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC29.81■■■□□ 2.36
CHD1LQ86WJ1 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC29.8■■■□□ 2.36
CHD1LQ86WJ1 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC29.8■■■□□ 2.36
CHD1LQ86WJ1 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC29.8■■■□□ 2.36
CHD1LQ86WJ1 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC29.8■■■□□ 2.36
CHD1LQ86WJ1 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC29.79■■■□□ 2.36
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms