Protein–RNA interactions for Protein: Q86UE3

ZNF546, Zinc finger protein 546, humanhuman

Predictions only

Length 836 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF546Q86UE3 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
ZNF546Q86UE3 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
ZNF546Q86UE3 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
ZNF546Q86UE3 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC20.01■□□□□ 0.79
ZNF546Q86UE3 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
ZNF546Q86UE3 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC20■□□□□ 0.79
ZNF546Q86UE3 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC20■□□□□ 0.79
ZNF546Q86UE3 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
ZNF546Q86UE3 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
ZNF546Q86UE3 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
ZNF546Q86UE3 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC19.99■□□□□ 0.79
ZNF546Q86UE3 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC19.99■□□□□ 0.79
ZNF546Q86UE3 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
ZNF546Q86UE3 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
ZNF546Q86UE3 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
ZNF546Q86UE3 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
ZNF546Q86UE3 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
ZNF546Q86UE3 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
ZNF546Q86UE3 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
ZNF546Q86UE3 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
ZNF546Q86UE3 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
ZNF546Q86UE3 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC19.98■□□□□ 0.79
ZNF546Q86UE3 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
ZNF546Q86UE3 DENR-202ENST00000455982 1052 ntTSL 5 BASIC19.98■□□□□ 0.79
ZNF546Q86UE3 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC19.98■□□□□ 0.79
ZNF546Q86UE3 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC19.98■□□□□ 0.79
ZNF546Q86UE3 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
ZNF546Q86UE3 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
ZNF546Q86UE3 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC19.97■□□□□ 0.79
ZNF546Q86UE3 RARRES2P7-201ENST00000567349 469 ntBASIC19.97■□□□□ 0.79
ZNF546Q86UE3 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC19.97■□□□□ 0.79
ZNF546Q86UE3 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC19.97■□□□□ 0.79
ZNF546Q86UE3 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
ZNF546Q86UE3 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
ZNF546Q86UE3 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
ZNF546Q86UE3 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
ZNF546Q86UE3 AC097639.1-201ENST00000565519 1891 ntBASIC19.96■□□□□ 0.79
ZNF546Q86UE3 LINC01124-201ENST00000409786 2117 ntBASIC19.96■□□□□ 0.79
ZNF546Q86UE3 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
ZNF546Q86UE3 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
ZNF546Q86UE3 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
ZNF546Q86UE3 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
ZNF546Q86UE3 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
ZNF546Q86UE3 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC19.95■□□□□ 0.78
ZNF546Q86UE3 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC19.95■□□□□ 0.78
ZNF546Q86UE3 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
ZNF546Q86UE3 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
ZNF546Q86UE3 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
ZNF546Q86UE3 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
ZNF546Q86UE3 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC19.95■□□□□ 0.78
ZNF546Q86UE3 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
ZNF546Q86UE3 SETD8P1-201ENST00000623146 1180 ntBASIC19.95■□□□□ 0.78
ZNF546Q86UE3 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
ZNF546Q86UE3 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC19.95■□□□□ 0.78
ZNF546Q86UE3 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
ZNF546Q86UE3 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
ZNF546Q86UE3 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC19.94■□□□□ 0.78
ZNF546Q86UE3 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
ZNF546Q86UE3 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
ZNF546Q86UE3 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
ZNF546Q86UE3 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC19.93■□□□□ 0.78
ZNF546Q86UE3 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC19.93■□□□□ 0.78
ZNF546Q86UE3 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
ZNF546Q86UE3 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
ZNF546Q86UE3 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
ZNF546Q86UE3 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC19.92■□□□□ 0.78
ZNF546Q86UE3 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
ZNF546Q86UE3 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
ZNF546Q86UE3 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
ZNF546Q86UE3 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC19.92■□□□□ 0.78
ZNF546Q86UE3 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
ZNF546Q86UE3 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
ZNF546Q86UE3 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
ZNF546Q86UE3 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
ZNF546Q86UE3 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
ZNF546Q86UE3 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC19.91■□□□□ 0.78
ZNF546Q86UE3 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
ZNF546Q86UE3 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
ZNF546Q86UE3 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
ZNF546Q86UE3 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
ZNF546Q86UE3 EBPL-202ENST00000378268 680 ntTSL 3 BASIC19.9■□□□□ 0.78
ZNF546Q86UE3 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
ZNF546Q86UE3 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC19.9■□□□□ 0.78
ZNF546Q86UE3 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
ZNF546Q86UE3 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
ZNF546Q86UE3 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
ZNF546Q86UE3 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
ZNF546Q86UE3 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC19.89■□□□□ 0.77
ZNF546Q86UE3 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
ZNF546Q86UE3 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
ZNF546Q86UE3 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC19.88■□□□□ 0.77
ZNF546Q86UE3 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
ZNF546Q86UE3 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC19.88■□□□□ 0.77
ZNF546Q86UE3 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
ZNF546Q86UE3 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC19.88■□□□□ 0.77
ZNF546Q86UE3 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
ZNF546Q86UE3 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
ZNF546Q86UE3 DUSP8P5-201ENST00000422884 1815 ntBASIC19.88■□□□□ 0.77
ZNF546Q86UE3 EED-207ENST00000528180 1745 ntTSL 5 BASIC19.88■□□□□ 0.77
ZNF546Q86UE3 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 16.8 ms