Protein–RNA interactions for Protein: Q7Z401

DENND4A, C-myc promoter-binding protein, humanhuman

Predictions only

Length 1,863 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DENND4AQ7Z401 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
DENND4AQ7Z401 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC25.4■■□□□ 1.66
DENND4AQ7Z401 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
DENND4AQ7Z401 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC25.4■■□□□ 1.66
DENND4AQ7Z401 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC25.4■■□□□ 1.66
DENND4AQ7Z401 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
DENND4AQ7Z401 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
DENND4AQ7Z401 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
DENND4AQ7Z401 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC25.39■■□□□ 1.66
DENND4AQ7Z401 MIR4787-201ENST00000607364 84 ntBASIC25.39■■□□□ 1.66
DENND4AQ7Z401 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC25.39■■□□□ 1.65
DENND4AQ7Z401 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.65
DENND4AQ7Z401 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC25.39■■□□□ 1.65
DENND4AQ7Z401 AC022616.5-201ENST00000518796 181 ntBASIC25.38■■□□□ 1.65
DENND4AQ7Z401 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC25.38■■□□□ 1.65
DENND4AQ7Z401 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC25.38■■□□□ 1.65
DENND4AQ7Z401 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
DENND4AQ7Z401 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC25.38■■□□□ 1.65
DENND4AQ7Z401 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC25.38■■□□□ 1.65
DENND4AQ7Z401 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC25.38■■□□□ 1.65
DENND4AQ7Z401 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
DENND4AQ7Z401 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC25.37■■□□□ 1.65
DENND4AQ7Z401 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC25.37■■□□□ 1.65
DENND4AQ7Z401 AC131281.2-201ENST00000520478 145 ntBASIC25.37■■□□□ 1.65
DENND4AQ7Z401 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC25.37■■□□□ 1.65
DENND4AQ7Z401 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
DENND4AQ7Z401 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC25.36■■□□□ 1.65
DENND4AQ7Z401 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
DENND4AQ7Z401 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
DENND4AQ7Z401 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
DENND4AQ7Z401 AC008406.3-201ENST00000620001 1374 ntBASIC25.35■■□□□ 1.65
DENND4AQ7Z401 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
DENND4AQ7Z401 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC25.35■■□□□ 1.65
DENND4AQ7Z401 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC25.35■■□□□ 1.65
DENND4AQ7Z401 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC25.35■■□□□ 1.65
DENND4AQ7Z401 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
DENND4AQ7Z401 LONRF2P2-201ENST00000439212 571 ntBASIC25.34■■□□□ 1.65
DENND4AQ7Z401 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
DENND4AQ7Z401 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC25.34■■□□□ 1.65
DENND4AQ7Z401 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
DENND4AQ7Z401 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC25.34■■□□□ 1.65
DENND4AQ7Z401 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
DENND4AQ7Z401 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC25.34■■□□□ 1.65
DENND4AQ7Z401 KRT125P-201ENST00000546827 989 ntBASIC25.34■■□□□ 1.65
DENND4AQ7Z401 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC25.34■■□□□ 1.65
DENND4AQ7Z401 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
DENND4AQ7Z401 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC25.33■■□□□ 1.65
DENND4AQ7Z401 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
DENND4AQ7Z401 MIR935-201ENST00000401179 91 ntBASIC25.32■■□□□ 1.64
DENND4AQ7Z401 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
DENND4AQ7Z401 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
DENND4AQ7Z401 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC25.32■■□□□ 1.64
DENND4AQ7Z401 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
DENND4AQ7Z401 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
DENND4AQ7Z401 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC25.32■■□□□ 1.64
DENND4AQ7Z401 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC25.32■■□□□ 1.64
DENND4AQ7Z401 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC25.32■■□□□ 1.64
DENND4AQ7Z401 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
DENND4AQ7Z401 MIR638-201ENST00000385237 100 ntBASIC25.31■■□□□ 1.64
DENND4AQ7Z401 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC25.3■■□□□ 1.64
DENND4AQ7Z401 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
DENND4AQ7Z401 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC25.3■■□□□ 1.64
DENND4AQ7Z401 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC25.3■■□□□ 1.64
DENND4AQ7Z401 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC25.3■■□□□ 1.64
DENND4AQ7Z401 PROC-203ENST00000409048 1586 ntTSL 5 BASIC25.29■■□□□ 1.64
DENND4AQ7Z401 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC25.29■■□□□ 1.64
DENND4AQ7Z401 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC25.29■■□□□ 1.64
DENND4AQ7Z401 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC25.29■■□□□ 1.64
DENND4AQ7Z401 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
DENND4AQ7Z401 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC25.28■■□□□ 1.64
DENND4AQ7Z401 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC25.28■■□□□ 1.64
DENND4AQ7Z401 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC25.28■■□□□ 1.64
DENND4AQ7Z401 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC25.28■■□□□ 1.64
DENND4AQ7Z401 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
DENND4AQ7Z401 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
DENND4AQ7Z401 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC25.26■■□□□ 1.63
DENND4AQ7Z401 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
DENND4AQ7Z401 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC25.26■■□□□ 1.63
DENND4AQ7Z401 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC25.26■■□□□ 1.63
DENND4AQ7Z401 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
DENND4AQ7Z401 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC25.25■■□□□ 1.63
DENND4AQ7Z401 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC25.25■■□□□ 1.63
DENND4AQ7Z401 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
DENND4AQ7Z401 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC25.25■■□□□ 1.63
DENND4AQ7Z401 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
DENND4AQ7Z401 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC25.24■■□□□ 1.63
DENND4AQ7Z401 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC25.24■■□□□ 1.63
DENND4AQ7Z401 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC25.24■■□□□ 1.63
DENND4AQ7Z401 AC137630.3-201ENST00000607245 391 ntBASIC25.24■■□□□ 1.63
DENND4AQ7Z401 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC25.24■■□□□ 1.63
DENND4AQ7Z401 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
DENND4AQ7Z401 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
DENND4AQ7Z401 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC25.24■■□□□ 1.63
DENND4AQ7Z401 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
DENND4AQ7Z401 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
DENND4AQ7Z401 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC25.23■■□□□ 1.63
DENND4AQ7Z401 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC25.23■■□□□ 1.63
DENND4AQ7Z401 KRT18P24-201ENST00000344739 1156 ntBASIC25.23■■□□□ 1.63
DENND4AQ7Z401 PEMT-206ENST00000435340 960 ntTSL 5 BASIC25.23■■□□□ 1.63
DENND4AQ7Z401 MIR4281-201ENST00000580852 62 ntBASIC25.23■■□□□ 1.63
Retrieved 100 of 98,524 protein–RNA pairs in 16.5 ms