Protein–RNA interactions for Protein: Q6ZTQ4

CDHR3, Cadherin-related family member 3, humanhuman

Predictions only

Length 885 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3Q6ZTQ4 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
CDHR3Q6ZTQ4 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
CDHR3Q6ZTQ4 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
CDHR3Q6ZTQ4 TPT1-202ENST00000379055 948 ntTSL 2 BASIC24.25■■□□□ 1.47
CDHR3Q6ZTQ4 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
CDHR3Q6ZTQ4 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
CDHR3Q6ZTQ4 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC24.24■■□□□ 1.47
CDHR3Q6ZTQ4 AC148477.6-201ENST00000623746 465 ntBASIC24.24■■□□□ 1.47
CDHR3Q6ZTQ4 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
CDHR3Q6ZTQ4 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC24.24■■□□□ 1.47
CDHR3Q6ZTQ4 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC24.24■■□□□ 1.47
CDHR3Q6ZTQ4 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC24.23■■□□□ 1.47
CDHR3Q6ZTQ4 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC24.23■■□□□ 1.47
CDHR3Q6ZTQ4 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC24.23■■□□□ 1.47
CDHR3Q6ZTQ4 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
CDHR3Q6ZTQ4 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
CDHR3Q6ZTQ4 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC24.22■■□□□ 1.47
CDHR3Q6ZTQ4 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC24.22■■□□□ 1.47
CDHR3Q6ZTQ4 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC24.22■■□□□ 1.47
CDHR3Q6ZTQ4 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC24.22■■□□□ 1.47
CDHR3Q6ZTQ4 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
CDHR3Q6ZTQ4 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
CDHR3Q6ZTQ4 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
CDHR3Q6ZTQ4 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC24.22■■□□□ 1.47
CDHR3Q6ZTQ4 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
CDHR3Q6ZTQ4 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC24.21■■□□□ 1.47
CDHR3Q6ZTQ4 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC24.21■■□□□ 1.47
CDHR3Q6ZTQ4 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC24.21■■□□□ 1.47
CDHR3Q6ZTQ4 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC24.21■■□□□ 1.47
CDHR3Q6ZTQ4 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC24.21■■□□□ 1.47
CDHR3Q6ZTQ4 MED17-227ENST00000640521 2047 ntTSL 5 BASIC24.21■■□□□ 1.47
CDHR3Q6ZTQ4 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC24.21■■□□□ 1.47
CDHR3Q6ZTQ4 MIR219A2-201ENST00000608502 1504 ntBASIC24.2■■□□□ 1.47
CDHR3Q6ZTQ4 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.47
CDHR3Q6ZTQ4 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC24.2■■□□□ 1.47
CDHR3Q6ZTQ4 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC24.2■■□□□ 1.47
CDHR3Q6ZTQ4 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC24.2■■□□□ 1.46
CDHR3Q6ZTQ4 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
CDHR3Q6ZTQ4 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC24.2■■□□□ 1.46
CDHR3Q6ZTQ4 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC24.2■■□□□ 1.46
CDHR3Q6ZTQ4 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
CDHR3Q6ZTQ4 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
CDHR3Q6ZTQ4 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC24.2■■□□□ 1.46
CDHR3Q6ZTQ4 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC24.2■■□□□ 1.46
CDHR3Q6ZTQ4 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC24.19■■□□□ 1.46
CDHR3Q6ZTQ4 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC24.19■■□□□ 1.46
CDHR3Q6ZTQ4 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC24.19■■□□□ 1.46
CDHR3Q6ZTQ4 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
CDHR3Q6ZTQ4 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
CDHR3Q6ZTQ4 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
CDHR3Q6ZTQ4 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
CDHR3Q6ZTQ4 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC24.18■■□□□ 1.46
CDHR3Q6ZTQ4 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
CDHR3Q6ZTQ4 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC24.17■■□□□ 1.46
CDHR3Q6ZTQ4 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC24.17■■□□□ 1.46
CDHR3Q6ZTQ4 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
CDHR3Q6ZTQ4 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
CDHR3Q6ZTQ4 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC24.17■■□□□ 1.46
CDHR3Q6ZTQ4 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC24.17■■□□□ 1.46
CDHR3Q6ZTQ4 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC24.16■■□□□ 1.46
CDHR3Q6ZTQ4 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
CDHR3Q6ZTQ4 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
CDHR3Q6ZTQ4 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC24.16■■□□□ 1.46
CDHR3Q6ZTQ4 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
CDHR3Q6ZTQ4 AC142381.3-201ENST00000568208 1670 ntBASIC24.16■■□□□ 1.46
CDHR3Q6ZTQ4 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC24.16■■□□□ 1.46
CDHR3Q6ZTQ4 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
CDHR3Q6ZTQ4 BRD4-212ENST00000630599 726 ntTSL 2 BASIC24.16■■□□□ 1.46
CDHR3Q6ZTQ4 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
CDHR3Q6ZTQ4 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
CDHR3Q6ZTQ4 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
CDHR3Q6ZTQ4 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
CDHR3Q6ZTQ4 GPX1-201ENST00000419349 1106 ntBASIC24.15■■□□□ 1.46
CDHR3Q6ZTQ4 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC24.15■■□□□ 1.46
CDHR3Q6ZTQ4 AC096887.2-201ENST00000623443 1957 ntBASIC24.14■■□□□ 1.46
CDHR3Q6ZTQ4 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC24.14■■□□□ 1.46
CDHR3Q6ZTQ4 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC24.14■■□□□ 1.45
CDHR3Q6ZTQ4 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
CDHR3Q6ZTQ4 CEP120-209ENST00000515110 606 ntTSL 3 BASIC24.14■■□□□ 1.45
CDHR3Q6ZTQ4 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC24.14■■□□□ 1.45
CDHR3Q6ZTQ4 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC24.14■■□□□ 1.45
CDHR3Q6ZTQ4 AC022211.4-201ENST00000625094 2161 ntBASIC24.14■■□□□ 1.45
CDHR3Q6ZTQ4 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC24.14■■□□□ 1.45
CDHR3Q6ZTQ4 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC24.14■■□□□ 1.45
CDHR3Q6ZTQ4 AC138932.3-201ENST00000567634 1902 ntBASIC24.14■■□□□ 1.45
CDHR3Q6ZTQ4 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC24.14■■□□□ 1.45
CDHR3Q6ZTQ4 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
CDHR3Q6ZTQ4 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC24.13■■□□□ 1.45
CDHR3Q6ZTQ4 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC24.13■■□□□ 1.45
CDHR3Q6ZTQ4 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC24.13■■□□□ 1.45
CDHR3Q6ZTQ4 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC24.12■■□□□ 1.45
CDHR3Q6ZTQ4 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
CDHR3Q6ZTQ4 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
CDHR3Q6ZTQ4 THRA-202ENST00000394121 2260 ntTSL 2 BASIC24.12■■□□□ 1.45
CDHR3Q6ZTQ4 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
CDHR3Q6ZTQ4 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC24.12■■□□□ 1.45
CDHR3Q6ZTQ4 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
CDHR3Q6ZTQ4 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
CDHR3Q6ZTQ4 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
CDHR3Q6ZTQ4 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC24.11■■□□□ 1.45
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms