Protein–RNA interactions for Protein: Q6PJQ5

FOXR2, Forkhead box protein R2, humanhuman

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR2Q6PJQ5 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
FOXR2Q6PJQ5 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC26.53■■□□□ 1.84
FOXR2Q6PJQ5 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC26.53■■□□□ 1.84
FOXR2Q6PJQ5 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC26.53■■□□□ 1.84
FOXR2Q6PJQ5 AC092296.2-201ENST00000589470 999 ntBASIC26.53■■□□□ 1.84
FOXR2Q6PJQ5 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
FOXR2Q6PJQ5 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC26.53■■□□□ 1.84
FOXR2Q6PJQ5 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
FOXR2Q6PJQ5 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC26.53■■□□□ 1.84
FOXR2Q6PJQ5 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
FOXR2Q6PJQ5 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC26.52■■□□□ 1.84
FOXR2Q6PJQ5 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC26.52■■□□□ 1.84
FOXR2Q6PJQ5 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC26.52■■□□□ 1.84
FOXR2Q6PJQ5 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC26.51■■□□□ 1.83
FOXR2Q6PJQ5 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC26.51■■□□□ 1.83
FOXR2Q6PJQ5 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC26.51■■□□□ 1.83
FOXR2Q6PJQ5 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC26.51■■□□□ 1.83
FOXR2Q6PJQ5 SRP68-213ENST00000629930 165 ntTSL 5 BASIC26.51■■□□□ 1.83
FOXR2Q6PJQ5 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
FOXR2Q6PJQ5 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
FOXR2Q6PJQ5 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC26.5■■□□□ 1.83
FOXR2Q6PJQ5 MOB2-207ENST00000614710 705 ntTSL 5 BASIC26.5■■□□□ 1.83
FOXR2Q6PJQ5 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
FOXR2Q6PJQ5 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC26.5■■□□□ 1.83
FOXR2Q6PJQ5 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
FOXR2Q6PJQ5 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
FOXR2Q6PJQ5 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC26.49■■□□□ 1.83
FOXR2Q6PJQ5 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
FOXR2Q6PJQ5 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
FOXR2Q6PJQ5 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
FOXR2Q6PJQ5 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
FOXR2Q6PJQ5 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC26.49■■□□□ 1.83
FOXR2Q6PJQ5 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC26.49■■□□□ 1.83
FOXR2Q6PJQ5 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
FOXR2Q6PJQ5 RPS2-202ENST00000526522 924 ntTSL 2 BASIC26.48■■□□□ 1.83
FOXR2Q6PJQ5 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC26.48■■□□□ 1.83
FOXR2Q6PJQ5 CEBPA-AS1-201ENST00000592982 2198 ntBASIC26.48■■□□□ 1.83
FOXR2Q6PJQ5 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC26.48■■□□□ 1.83
FOXR2Q6PJQ5 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
FOXR2Q6PJQ5 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC26.47■■□□□ 1.83
FOXR2Q6PJQ5 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC26.46■■□□□ 1.83
FOXR2Q6PJQ5 MIR3960-201ENST00000583311 91 ntBASIC26.46■■□□□ 1.83
FOXR2Q6PJQ5 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
FOXR2Q6PJQ5 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC26.45■■□□□ 1.83
FOXR2Q6PJQ5 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC26.45■■□□□ 1.83
FOXR2Q6PJQ5 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
FOXR2Q6PJQ5 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
FOXR2Q6PJQ5 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC26.45■■□□□ 1.82
FOXR2Q6PJQ5 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC26.44■■□□□ 1.82
FOXR2Q6PJQ5 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC26.44■■□□□ 1.82
FOXR2Q6PJQ5 SNAI3-AS1-204ENST00000567997 2048 ntBASIC26.44■■□□□ 1.82
FOXR2Q6PJQ5 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC26.44■■□□□ 1.82
FOXR2Q6PJQ5 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC26.44■■□□□ 1.82
FOXR2Q6PJQ5 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC26.44■■□□□ 1.82
FOXR2Q6PJQ5 ECEL1P2-201ENST00000461596 1295 ntBASIC26.44■■□□□ 1.82
FOXR2Q6PJQ5 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC26.44■■□□□ 1.82
FOXR2Q6PJQ5 PVT1-219ENST00000523427 938 ntTSL 3 BASIC26.44■■□□□ 1.82
FOXR2Q6PJQ5 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC26.43■■□□□ 1.82
FOXR2Q6PJQ5 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC26.43■■□□□ 1.82
FOXR2Q6PJQ5 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC26.43■■□□□ 1.82
FOXR2Q6PJQ5 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC26.43■■□□□ 1.82
FOXR2Q6PJQ5 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC26.43■■□□□ 1.82
FOXR2Q6PJQ5 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
FOXR2Q6PJQ5 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC26.42■■□□□ 1.82
FOXR2Q6PJQ5 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC26.42■■□□□ 1.82
FOXR2Q6PJQ5 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
FOXR2Q6PJQ5 AC142381.3-201ENST00000568208 1670 ntBASIC26.42■■□□□ 1.82
FOXR2Q6PJQ5 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
FOXR2Q6PJQ5 TPT1-202ENST00000379055 948 ntTSL 2 BASIC26.42■■□□□ 1.82
FOXR2Q6PJQ5 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC26.42■■□□□ 1.82
FOXR2Q6PJQ5 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC26.42■■□□□ 1.82
FOXR2Q6PJQ5 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
FOXR2Q6PJQ5 SMPD5-203ENST00000639008 1464 ntBASIC26.42■■□□□ 1.82
FOXR2Q6PJQ5 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC26.41■■□□□ 1.82
FOXR2Q6PJQ5 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC26.41■■□□□ 1.82
FOXR2Q6PJQ5 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
FOXR2Q6PJQ5 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC26.39■■□□□ 1.82
FOXR2Q6PJQ5 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC26.39■■□□□ 1.82
FOXR2Q6PJQ5 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
FOXR2Q6PJQ5 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC26.39■■□□□ 1.82
FOXR2Q6PJQ5 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC26.39■■□□□ 1.82
FOXR2Q6PJQ5 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC26.39■■□□□ 1.82
FOXR2Q6PJQ5 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC26.39■■□□□ 1.82
FOXR2Q6PJQ5 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC26.39■■□□□ 1.81
FOXR2Q6PJQ5 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC26.39■■□□□ 1.81
FOXR2Q6PJQ5 REST-210ENST00000638187 1334 ntTSL 5 BASIC26.39■■□□□ 1.81
FOXR2Q6PJQ5 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC26.38■■□□□ 1.81
FOXR2Q6PJQ5 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
FOXR2Q6PJQ5 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
FOXR2Q6PJQ5 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC26.38■■□□□ 1.81
FOXR2Q6PJQ5 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
FOXR2Q6PJQ5 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
FOXR2Q6PJQ5 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC26.38■■□□□ 1.81
FOXR2Q6PJQ5 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC26.38■■□□□ 1.81
FOXR2Q6PJQ5 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC26.38■■□□□ 1.81
FOXR2Q6PJQ5 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC26.37■■□□□ 1.81
FOXR2Q6PJQ5 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC26.37■■□□□ 1.81
FOXR2Q6PJQ5 AC097639.1-201ENST00000565519 1891 ntBASIC26.36■■□□□ 1.81
FOXR2Q6PJQ5 MIR4449-201ENST00000578365 66 ntBASIC26.36■■□□□ 1.81
FOXR2Q6PJQ5 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC26.35■■□□□ 1.81
Retrieved 100 of 98,524 protein–RNA pairs in 18 ms