Protein–RNA interactions for Protein: Q6PIV2

FOXR1, Forkhead box protein R1, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1Q6PIV2 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC25■■□□□ 1.59
FOXR1Q6PIV2 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC25■■□□□ 1.59
FOXR1Q6PIV2 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC25■■□□□ 1.59
FOXR1Q6PIV2 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
FOXR1Q6PIV2 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
FOXR1Q6PIV2 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
FOXR1Q6PIV2 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC24.99■■□□□ 1.59
FOXR1Q6PIV2 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC24.99■■□□□ 1.59
FOXR1Q6PIV2 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC24.99■■□□□ 1.59
FOXR1Q6PIV2 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC24.98■■□□□ 1.59
FOXR1Q6PIV2 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC24.98■■□□□ 1.59
FOXR1Q6PIV2 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
FOXR1Q6PIV2 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
FOXR1Q6PIV2 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC24.98■■□□□ 1.59
FOXR1Q6PIV2 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC24.98■■□□□ 1.59
FOXR1Q6PIV2 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
FOXR1Q6PIV2 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
FOXR1Q6PIV2 AC068473.5-201ENST00000616428 2072 ntBASIC24.97■■□□□ 1.59
FOXR1Q6PIV2 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
FOXR1Q6PIV2 RARRES2P2-201ENST00000394842 485 ntBASIC24.97■■□□□ 1.59
FOXR1Q6PIV2 GPX1-201ENST00000419349 1106 ntBASIC24.97■■□□□ 1.59
FOXR1Q6PIV2 SRP68-213ENST00000629930 165 ntTSL 5 BASIC24.97■■□□□ 1.59
FOXR1Q6PIV2 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
FOXR1Q6PIV2 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
FOXR1Q6PIV2 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
FOXR1Q6PIV2 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
FOXR1Q6PIV2 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
FOXR1Q6PIV2 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
FOXR1Q6PIV2 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
FOXR1Q6PIV2 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
FOXR1Q6PIV2 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
FOXR1Q6PIV2 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC24.95■■□□□ 1.58
FOXR1Q6PIV2 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
FOXR1Q6PIV2 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC24.95■■□□□ 1.58
FOXR1Q6PIV2 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
FOXR1Q6PIV2 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC24.95■■□□□ 1.58
FOXR1Q6PIV2 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC24.95■■□□□ 1.58
FOXR1Q6PIV2 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
FOXR1Q6PIV2 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
FOXR1Q6PIV2 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC24.94■■□□□ 1.58
FOXR1Q6PIV2 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC24.94■■□□□ 1.58
FOXR1Q6PIV2 CEP120-209ENST00000515110 606 ntTSL 3 BASIC24.94■■□□□ 1.58
FOXR1Q6PIV2 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC24.94■■□□□ 1.58
FOXR1Q6PIV2 MED17-227ENST00000640521 2047 ntTSL 5 BASIC24.94■■□□□ 1.58
FOXR1Q6PIV2 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC24.94■■□□□ 1.58
FOXR1Q6PIV2 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
FOXR1Q6PIV2 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC24.94■■□□□ 1.58
FOXR1Q6PIV2 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
FOXR1Q6PIV2 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC24.93■■□□□ 1.58
FOXR1Q6PIV2 AC079834.2-201ENST00000609776 1949 ntBASIC24.93■■□□□ 1.58
FOXR1Q6PIV2 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC24.93■■□□□ 1.58
FOXR1Q6PIV2 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC24.93■■□□□ 1.58
FOXR1Q6PIV2 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC24.93■■□□□ 1.58
FOXR1Q6PIV2 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC24.93■■□□□ 1.58
FOXR1Q6PIV2 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC24.93■■□□□ 1.58
FOXR1Q6PIV2 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC24.93■■□□□ 1.58
FOXR1Q6PIV2 LINC00543-201ENST00000567234 1845 ntBASIC24.93■■□□□ 1.58
FOXR1Q6PIV2 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC24.93■■□□□ 1.58
FOXR1Q6PIV2 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC24.93■■□□□ 1.58
FOXR1Q6PIV2 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC24.93■■□□□ 1.58
FOXR1Q6PIV2 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC24.92■■□□□ 1.58
FOXR1Q6PIV2 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC24.92■■□□□ 1.58
FOXR1Q6PIV2 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC24.92■■□□□ 1.58
FOXR1Q6PIV2 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
FOXR1Q6PIV2 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
FOXR1Q6PIV2 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC24.91■■□□□ 1.58
FOXR1Q6PIV2 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC24.91■■□□□ 1.58
FOXR1Q6PIV2 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
FOXR1Q6PIV2 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC24.9■■□□□ 1.58
FOXR1Q6PIV2 ABHD17AP5-201ENST00000580133 923 ntBASIC24.9■■□□□ 1.58
FOXR1Q6PIV2 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC24.9■■□□□ 1.58
FOXR1Q6PIV2 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.58
FOXR1Q6PIV2 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC24.89■■□□□ 1.58
FOXR1Q6PIV2 LINC00273-201ENST00000539813 1452 ntBASIC24.89■■□□□ 1.57
FOXR1Q6PIV2 AC100797.4-201ENST00000631653 1827 ntBASIC24.89■■□□□ 1.57
FOXR1Q6PIV2 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
FOXR1Q6PIV2 AL139125.2-201ENST00000623134 1869 ntBASIC24.87■■□□□ 1.57
FOXR1Q6PIV2 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
FOXR1Q6PIV2 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC24.87■■□□□ 1.57
FOXR1Q6PIV2 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
FOXR1Q6PIV2 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
FOXR1Q6PIV2 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC24.86■■□□□ 1.57
FOXR1Q6PIV2 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
FOXR1Q6PIV2 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC24.85■■□□□ 1.57
FOXR1Q6PIV2 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC24.85■■□□□ 1.57
FOXR1Q6PIV2 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC24.85■■□□□ 1.57
FOXR1Q6PIV2 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC24.85■■□□□ 1.57
FOXR1Q6PIV2 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC24.85■■□□□ 1.57
FOXR1Q6PIV2 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC24.85■■□□□ 1.57
FOXR1Q6PIV2 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
FOXR1Q6PIV2 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC24.84■■□□□ 1.57
FOXR1Q6PIV2 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC24.84■■□□□ 1.57
FOXR1Q6PIV2 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
FOXR1Q6PIV2 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC24.84■■□□□ 1.57
FOXR1Q6PIV2 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC24.83■■□□□ 1.57
FOXR1Q6PIV2 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC24.83■■□□□ 1.57
FOXR1Q6PIV2 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC24.83■■□□□ 1.57
FOXR1Q6PIV2 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC24.83■■□□□ 1.57
FOXR1Q6PIV2 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.56
FOXR1Q6PIV2 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC24.82■■□□□ 1.56
Retrieved 100 of 98,524 protein–RNA pairs in 100.5 ms