Protein–RNA interactions for Protein: P78371

CCT2, T-complex protein 1 subunit beta, humanhuman

Known RBP Predictions only

Length 535 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCT2P78371 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC28.39■■■□□ 2.14
CCT2P78371 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC28.39■■■□□ 2.13
CCT2P78371 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC28.38■■■□□ 2.13
CCT2P78371 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC28.38■■■□□ 2.13
CCT2P78371 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC28.37■■■□□ 2.13
CCT2P78371 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC28.37■■■□□ 2.13
CCT2P78371 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC28.37■■■□□ 2.13
CCT2P78371 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC28.37■■■□□ 2.13
CCT2P78371 ECEL1P2-201ENST00000461596 1295 ntBASIC28.37■■■□□ 2.13
CCT2P78371 ABHD17AP3-201ENST00000503096 1137 ntBASIC28.37■■■□□ 2.13
CCT2P78371 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC28.37■■■□□ 2.13
CCT2P78371 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC28.37■■■□□ 2.13
CCT2P78371 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC28.37■■■□□ 2.13
CCT2P78371 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC28.37■■■□□ 2.13
CCT2P78371 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
CCT2P78371 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC28.36■■■□□ 2.13
CCT2P78371 AC010501.1-201ENST00000606270 1962 ntBASIC28.36■■■□□ 2.13
CCT2P78371 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
CCT2P78371 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC28.35■■■□□ 2.13
CCT2P78371 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC28.35■■■□□ 2.13
CCT2P78371 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC28.35■■■□□ 2.13
CCT2P78371 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
CCT2P78371 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC28.35■■■□□ 2.13
CCT2P78371 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC28.34■■■□□ 2.13
CCT2P78371 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC28.34■■■□□ 2.13
CCT2P78371 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC28.34■■■□□ 2.13
CCT2P78371 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC28.34■■■□□ 2.13
CCT2P78371 PFN2-211ENST00000489155 636 ntTSL 4 BASIC28.34■■■□□ 2.13
CCT2P78371 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC28.34■■■□□ 2.13
CCT2P78371 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
CCT2P78371 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
CCT2P78371 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC28.34■■■□□ 2.13
CCT2P78371 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
CCT2P78371 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC28.34■■■□□ 2.13
CCT2P78371 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
CCT2P78371 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC28.33■■■□□ 2.13
CCT2P78371 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC28.33■■■□□ 2.13
CCT2P78371 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC28.33■■■□□ 2.13
CCT2P78371 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC28.33■■■□□ 2.12
CCT2P78371 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
CCT2P78371 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC28.32■■■□□ 2.12
CCT2P78371 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC28.32■■■□□ 2.12
CCT2P78371 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC28.32■■■□□ 2.12
CCT2P78371 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC28.32■■■□□ 2.12
CCT2P78371 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
CCT2P78371 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC28.31■■■□□ 2.12
CCT2P78371 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
CCT2P78371 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC28.3■■■□□ 2.12
CCT2P78371 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC28.3■■■□□ 2.12
CCT2P78371 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC28.3■■■□□ 2.12
CCT2P78371 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
CCT2P78371 MIR3960-201ENST00000583311 91 ntBASIC28.29■■■□□ 2.12
CCT2P78371 AC096887.2-201ENST00000623443 1957 ntBASIC28.29■■■□□ 2.12
CCT2P78371 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC28.29■■■□□ 2.12
CCT2P78371 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC28.29■■■□□ 2.12
CCT2P78371 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC28.28■■■□□ 2.12
CCT2P78371 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC28.28■■■□□ 2.12
CCT2P78371 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC28.28■■■□□ 2.12
CCT2P78371 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC28.27■■■□□ 2.12
CCT2P78371 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
CCT2P78371 REST-210ENST00000638187 1334 ntTSL 5 BASIC28.27■■■□□ 2.12
CCT2P78371 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
CCT2P78371 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC28.27■■■□□ 2.12
CCT2P78371 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC28.27■■■□□ 2.12
CCT2P78371 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC28.26■■■□□ 2.12
CCT2P78371 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC28.26■■■□□ 2.12
CCT2P78371 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC28.26■■■□□ 2.11
CCT2P78371 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC28.26■■■□□ 2.11
CCT2P78371 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC28.26■■■□□ 2.11
CCT2P78371 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC28.26■■■□□ 2.11
CCT2P78371 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC28.26■■■□□ 2.11
CCT2P78371 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC28.25■■■□□ 2.11
CCT2P78371 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC28.25■■■□□ 2.11
CCT2P78371 AC020928.2-201ENST00000588717 2197 ntBASIC28.25■■■□□ 2.11
CCT2P78371 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC28.25■■■□□ 2.11
CCT2P78371 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
CCT2P78371 HES4-202ENST00000428771 1040 ntTSL 2 BASIC28.24■■■□□ 2.11
CCT2P78371 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC28.24■■■□□ 2.11
CCT2P78371 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
CCT2P78371 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC28.23■■■□□ 2.11
CCT2P78371 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
CCT2P78371 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC28.23■■■□□ 2.11
CCT2P78371 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC28.23■■■□□ 2.11
CCT2P78371 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC28.23■■■□□ 2.11
CCT2P78371 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC28.23■■■□□ 2.11
CCT2P78371 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
CCT2P78371 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
CCT2P78371 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC28.22■■■□□ 2.11
CCT2P78371 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC28.22■■■□□ 2.11
CCT2P78371 RP9P-202ENST00000450133 1212 ntBASIC28.22■■■□□ 2.11
CCT2P78371 AC007029.1-201ENST00000604183 313 ntBASIC28.22■■■□□ 2.11
CCT2P78371 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC28.22■■■□□ 2.11
CCT2P78371 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC28.21■■■□□ 2.11
CCT2P78371 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
CCT2P78371 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC28.21■■■□□ 2.11
CCT2P78371 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC28.21■■■□□ 2.11
CCT2P78371 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC28.21■■■□□ 2.11
CCT2P78371 AC093536.1-201ENST00000569153 554 ntBASIC28.21■■■□□ 2.11
CCT2P78371 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC28.2■■■□□ 2.11
CCT2P78371 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.11
Retrieved 100 of 98,524 protein–RNA pairs in 66.4 ms