Protein–RNA interactions for Protein: P56704

WNT3A, Protein Wnt-3a, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
WNT3AP56704 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC24.51■■□□□ 1.51
WNT3AP56704 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
WNT3AP56704 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC24.51■■□□□ 1.51
WNT3AP56704 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC24.51■■□□□ 1.51
WNT3AP56704 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC24.51■■□□□ 1.51
WNT3AP56704 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC24.51■■□□□ 1.51
WNT3AP56704 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC24.51■■□□□ 1.51
WNT3AP56704 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
WNT3AP56704 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC24.5■■□□□ 1.51
WNT3AP56704 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC24.5■■□□□ 1.51
WNT3AP56704 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC24.5■■□□□ 1.51
WNT3AP56704 AC010501.1-201ENST00000606270 1962 ntBASIC24.5■■□□□ 1.51
WNT3AP56704 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
WNT3AP56704 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
WNT3AP56704 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC24.49■■□□□ 1.51
WNT3AP56704 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC24.49■■□□□ 1.51
WNT3AP56704 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
WNT3AP56704 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
WNT3AP56704 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC24.49■■□□□ 1.51
WNT3AP56704 AC007029.1-201ENST00000604183 313 ntBASIC24.49■■□□□ 1.51
WNT3AP56704 RNF126P1-201ENST00000567452 1320 ntBASIC24.49■■□□□ 1.51
WNT3AP56704 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
WNT3AP56704 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
WNT3AP56704 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC24.48■■□□□ 1.51
WNT3AP56704 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC24.48■■□□□ 1.51
WNT3AP56704 RP9P-202ENST00000450133 1212 ntBASIC24.48■■□□□ 1.51
WNT3AP56704 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
WNT3AP56704 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC24.48■■□□□ 1.51
WNT3AP56704 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
WNT3AP56704 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC24.47■■□□□ 1.51
WNT3AP56704 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
WNT3AP56704 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
WNT3AP56704 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC24.47■■□□□ 1.51
WNT3AP56704 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC24.46■■□□□ 1.51
WNT3AP56704 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
WNT3AP56704 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC24.46■■□□□ 1.51
WNT3AP56704 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
WNT3AP56704 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC24.45■■□□□ 1.51
WNT3AP56704 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.51
WNT3AP56704 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.51
WNT3AP56704 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC24.45■■□□□ 1.51
WNT3AP56704 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
WNT3AP56704 AC093536.1-201ENST00000569153 554 ntBASIC24.45■■□□□ 1.5
WNT3AP56704 HSD17B1P1-201ENST00000590052 955 ntBASIC24.45■■□□□ 1.5
WNT3AP56704 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
WNT3AP56704 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
WNT3AP56704 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC24.45■■□□□ 1.5
WNT3AP56704 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC24.45■■□□□ 1.5
WNT3AP56704 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC24.44■■□□□ 1.5
WNT3AP56704 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
WNT3AP56704 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC24.44■■□□□ 1.5
WNT3AP56704 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
WNT3AP56704 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC24.43■■□□□ 1.5
WNT3AP56704 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
WNT3AP56704 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC24.43■■□□□ 1.5
WNT3AP56704 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC24.43■■□□□ 1.5
WNT3AP56704 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
WNT3AP56704 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC24.42■■□□□ 1.5
WNT3AP56704 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC24.42■■□□□ 1.5
WNT3AP56704 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
WNT3AP56704 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC24.42■■□□□ 1.5
WNT3AP56704 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC24.42■■□□□ 1.5
WNT3AP56704 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
WNT3AP56704 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
WNT3AP56704 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
WNT3AP56704 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
WNT3AP56704 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC24.4■■□□□ 1.5
WNT3AP56704 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
WNT3AP56704 AC096887.2-201ENST00000623443 1957 ntBASIC24.4■■□□□ 1.5
WNT3AP56704 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC24.4■■□□□ 1.5
WNT3AP56704 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC24.4■■□□□ 1.5
WNT3AP56704 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
WNT3AP56704 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC24.4■■□□□ 1.5
WNT3AP56704 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC24.4■■□□□ 1.5
WNT3AP56704 GFER-205ENST00000569451 517 ntTSL 5 BASIC24.4■■□□□ 1.5
WNT3AP56704 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC24.4■■□□□ 1.5
WNT3AP56704 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC24.39■■□□□ 1.49
WNT3AP56704 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC24.39■■□□□ 1.49
WNT3AP56704 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
WNT3AP56704 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
WNT3AP56704 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
WNT3AP56704 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC24.38■■□□□ 1.49
WNT3AP56704 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC24.38■■□□□ 1.49
WNT3AP56704 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
WNT3AP56704 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC24.38■■□□□ 1.49
WNT3AP56704 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
WNT3AP56704 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC24.37■■□□□ 1.49
WNT3AP56704 RARRES2P2-201ENST00000394842 485 ntBASIC24.36■■□□□ 1.49
WNT3AP56704 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC24.36■■□□□ 1.49
WNT3AP56704 AC026202.3-201ENST00000600805 1127 ntBASIC24.36■■□□□ 1.49
WNT3AP56704 RAP2CP1-202ENST00000605179 643 ntBASIC24.36■■□□□ 1.49
WNT3AP56704 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
WNT3AP56704 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
WNT3AP56704 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC24.36■■□□□ 1.49
WNT3AP56704 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC24.35■■□□□ 1.49
WNT3AP56704 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
WNT3AP56704 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC24.35■■□□□ 1.49
WNT3AP56704 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC24.34■■□□□ 1.49
WNT3AP56704 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
WNT3AP56704 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
Retrieved 100 of 98,524 protein–RNA pairs in 19.5 ms