Protein–RNA interactions for Protein: P51788

CLCN2, Chloride channel protein 2, humanhuman

Predictions only

Length 898 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN2P51788 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
CLCN2P51788 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC23.31■■□□□ 1.32
CLCN2P51788 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC23.31■■□□□ 1.32
CLCN2P51788 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC23.31■■□□□ 1.32
CLCN2P51788 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
CLCN2P51788 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
CLCN2P51788 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC23.3■■□□□ 1.32
CLCN2P51788 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC23.3■■□□□ 1.32
CLCN2P51788 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
CLCN2P51788 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC23.3■■□□□ 1.32
CLCN2P51788 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
CLCN2P51788 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC23.29■■□□□ 1.32
CLCN2P51788 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC23.29■■□□□ 1.32
CLCN2P51788 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC23.29■■□□□ 1.32
CLCN2P51788 AC126177.7-201ENST00000547904 679 ntBASIC23.29■■□□□ 1.32
CLCN2P51788 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC23.29■■□□□ 1.32
CLCN2P51788 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC23.29■■□□□ 1.32
CLCN2P51788 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC23.29■■□□□ 1.32
CLCN2P51788 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC23.28■■□□□ 1.32
CLCN2P51788 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
CLCN2P51788 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
CLCN2P51788 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
CLCN2P51788 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC23.27■■□□□ 1.32
CLCN2P51788 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
CLCN2P51788 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC23.27■■□□□ 1.32
CLCN2P51788 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
CLCN2P51788 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
CLCN2P51788 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
CLCN2P51788 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.31
CLCN2P51788 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
CLCN2P51788 AC092803.2-201ENST00000564287 1899 ntBASIC23.26■■□□□ 1.31
CLCN2P51788 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC23.26■■□□□ 1.31
CLCN2P51788 BRD4-212ENST00000630599 726 ntTSL 2 BASIC23.26■■□□□ 1.31
CLCN2P51788 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
CLCN2P51788 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC23.26■■□□□ 1.31
CLCN2P51788 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC23.26■■□□□ 1.31
CLCN2P51788 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC23.25■■□□□ 1.31
CLCN2P51788 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC23.25■■□□□ 1.31
CLCN2P51788 HES4-202ENST00000428771 1040 ntTSL 2 BASIC23.25■■□□□ 1.31
CLCN2P51788 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC23.25■■□□□ 1.31
CLCN2P51788 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC23.25■■□□□ 1.31
CLCN2P51788 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC23.24■■□□□ 1.31
CLCN2P51788 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
CLCN2P51788 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
CLCN2P51788 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC23.24■■□□□ 1.31
CLCN2P51788 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC23.24■■□□□ 1.31
CLCN2P51788 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC23.24■■□□□ 1.31
CLCN2P51788 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC23.23■■□□□ 1.31
CLCN2P51788 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC23.23■■□□□ 1.31
CLCN2P51788 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
CLCN2P51788 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC23.23■■□□□ 1.31
CLCN2P51788 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC23.23■■□□□ 1.31
CLCN2P51788 AC060814.1-201ENST00000554326 538 ntBASIC23.23■■□□□ 1.31
CLCN2P51788 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
CLCN2P51788 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
CLCN2P51788 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC23.23■■□□□ 1.31
CLCN2P51788 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC23.22■■□□□ 1.31
CLCN2P51788 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC23.22■■□□□ 1.31
CLCN2P51788 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
CLCN2P51788 RNF126P1-201ENST00000567452 1320 ntBASIC23.21■■□□□ 1.31
CLCN2P51788 ERN1-208ENST00000606895 2068 ntBASIC23.21■■□□□ 1.31
CLCN2P51788 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC23.21■■□□□ 1.31
CLCN2P51788 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
CLCN2P51788 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
CLCN2P51788 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
CLCN2P51788 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
CLCN2P51788 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC23.2■■□□□ 1.3
CLCN2P51788 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
CLCN2P51788 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC23.19■■□□□ 1.3
CLCN2P51788 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
CLCN2P51788 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
CLCN2P51788 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC23.19■■□□□ 1.3
CLCN2P51788 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
CLCN2P51788 CEBPA-AS1-201ENST00000592982 2198 ntBASIC23.19■■□□□ 1.3
CLCN2P51788 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC23.19■■□□□ 1.3
CLCN2P51788 MED25-210ENST00000612854 801 ntTSL 5 BASIC23.19■■□□□ 1.3
CLCN2P51788 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
CLCN2P51788 MED25-214ENST00000622402 642 ntTSL 5 BASIC23.19■■□□□ 1.3
CLCN2P51788 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
CLCN2P51788 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC23.18■■□□□ 1.3
CLCN2P51788 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
CLCN2P51788 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC23.18■■□□□ 1.3
CLCN2P51788 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC23.18■■□□□ 1.3
CLCN2P51788 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
CLCN2P51788 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
CLCN2P51788 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC23.17■■□□□ 1.3
CLCN2P51788 RARRES2P2-201ENST00000394842 485 ntBASIC23.17■■□□□ 1.3
CLCN2P51788 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC23.17■■□□□ 1.3
CLCN2P51788 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC23.17■■□□□ 1.3
CLCN2P51788 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
CLCN2P51788 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
CLCN2P51788 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC23.17■■□□□ 1.3
CLCN2P51788 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
CLCN2P51788 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC23.16■■□□□ 1.3
CLCN2P51788 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC23.16■■□□□ 1.3
CLCN2P51788 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC23.16■■□□□ 1.3
CLCN2P51788 AL359258.2-201ENST00000564063 1566 ntBASIC23.15■■□□□ 1.3
CLCN2P51788 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
CLCN2P51788 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC23.15■■□□□ 1.3
CLCN2P51788 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC23.15■■□□□ 1.3
Retrieved 100 of 98,524 protein–RNA pairs in 13.6 ms