Protein–RNA interactions for Protein: P38854

TDA11, Topoisomerase I damage affected protein 11, yeastyeast

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TDA11P38854 YKL153WYKL153W 510 nt6.21□□□□□ -1.42
TDA11P38854 IES2YNL215W 963 nt6.21□□□□□ -1.42
TDA11P38854 SKN1YGR143W 2316 nt6.21□□□□□ -1.42
TDA11P38854 CNE1YAL058W 1509 nt6.2□□□□□ -1.42
TDA11P38854 DOT1YDR440W 1749 nt6.2□□□□□ -1.42
TDA11P38854 YGL102CYGL102C 429 nt6.2□□□□□ -1.42
TDA11P38854 YIL029W-AYIL029W-A 372 nt6.2□□□□□ -1.42
TDA11P38854 YIR042CYIR042C 711 nt6.2□□□□□ -1.42
TDA11P38854 DPH5YLR172C 903 nt6.2□□□□□ -1.42
TDA11P38854 SCS22YBL091C-A 528 nt6.2□□□□□ -1.42
TDA11P38854 GPD1YDL022W 1176 nt6.19□□□□□ -1.42
TDA11P38854 YLR184WYLR184W 348 nt6.19□□□□□ -1.42
TDA11P38854 OGG1YML060W 1131 nt6.19□□□□□ -1.42
TDA11P38854 CRH1YGR189C 1524 nt6.19□□□□□ -1.42
TDA11P38854 NTE1YML059C 5040 nt6.18□□□□□ -1.42
TDA11P38854 YPL257WYPL257W 582 nt6.18□□□□□ -1.42
TDA11P38854 NHP6BYBR089C-A 300 nt6.18□□□□□ -1.42
TDA11P38854 COX10YPL172C 1389 nt6.18□□□□□ -1.42
TDA11P38854 MCM6YGL201C 3054 nt6.17□□□□□ -1.42
TDA11P38854 VPS70YJR126C 2436 nt6.17□□□□□ -1.42
TDA11P38854 SWD1YAR003W 1281 nt6.17□□□□□ -1.42
TDA11P38854 MRPL19YNL185C 477 nt6.17□□□□□ -1.42
TDA11P38854 RPL21AYBR191W 483 nt6.17□□□□□ -1.42
TDA11P38854 RBS1YDL189W 1374 nt6.17□□□□□ -1.42
TDA11P38854 CLB1YGR108W 1416 nt6.16□□□□□ -1.42
TDA11P38854 ICP55YER078C 1536 nt6.16□□□□□ -1.42
TDA11P38854 SFB3YHR098C 2790 nt6.15□□□□□ -1.42
TDA11P38854 KTR1YOR099W 1182 nt6.15□□□□□ -1.42
TDA11P38854 PYC2YBR218C 3543 nt6.15□□□□□ -1.43
TDA11P38854 HSP104YLL026W 2727 nt6.15□□□□□ -1.43
TDA11P38854 NUP49YGL172W 1419 nt6.15□□□□□ -1.43
TDA11P38854 YMR279CYMR279C 1623 nt6.14□□□□□ -1.43
TDA11P38854 PDR18YNR070W 4002 nt6.14□□□□□ -1.43
TDA11P38854 ASF1YJL115W 840 nt6.14□□□□□ -1.43
TDA11P38854 GPA2YER020W 1350 nt6.14□□□□□ -1.43
TDA11P38854 TNA1YGR260W 1605 nt6.14□□□□□ -1.43
TDA11P38854 HAL5YJL165C 2568 nt6.13□□□□□ -1.43
TDA11P38854 MNN5YJL186W 1761 nt6.13□□□□□ -1.43
TDA11P38854 MSC3YLR219W 2187 nt6.13□□□□□ -1.43
TDA11P38854 LCL3YGL085W 825 nt6.13□□□□□ -1.43
TDA11P38854 FMO1YHR176W 1299 nt6.13□□□□□ -1.43
TDA11P38854 YHR218W-AYHR218W-A 318 nt6.13□□□□□ -1.43
TDA11P38854 LCB3YJL134W 1230 nt6.13□□□□□ -1.43
TDA11P38854 YBL112CYBL112C 318 nt6.13□□□□□ -1.43
TDA11P38854 YOL163WYOL163W 510 nt6.13□□□□□ -1.43
TDA11P38854 VMA4YOR332W 702 nt6.13□□□□□ -1.43
TDA11P38854 YPL136WYPL136W 369 nt6.13□□□□□ -1.43
TDA11P38854 MKK2YPL140C 1521 nt6.13□□□□□ -1.43
TDA11P38854 HIR1YBL008W 2523 nt6.13□□□□□ -1.43
TDA11P38854 YKL018C-AYKL018C-A 300 nt6.12□□□□□ -1.43
TDA11P38854 MDH1YKL085W 1005 nt6.12□□□□□ -1.43
TDA11P38854 LDB16YCL005W 771 nt6.12□□□□□ -1.43
TDA11P38854 HRQ1YDR291W 3234 nt6.12□□□□□ -1.43
TDA11P38854 YEL020CYEL020C 1683 nt6.11□□□□□ -1.43
TDA11P38854 PET112YBL080C 1626 nt6.11□□□□□ -1.43
TDA11P38854 SAL1YNL083W 1485 nt6.11□□□□□ -1.43
TDA11P38854 MRPL35YDR322W 1104 nt6.11□□□□□ -1.43
TDA11P38854 YIL077CYIL077C 963 nt6.11□□□□□ -1.43
TDA11P38854 DRE2YKR071C 1047 nt6.11□□□□□ -1.43
TDA11P38854 DAP1YPL170W 459 nt6.11□□□□□ -1.43
TDA11P38854 NMT1YLR195C 1368 nt6.1□□□□□ -1.43
TDA11P38854 RPE1YJL121C 717 nt6.1□□□□□ -1.43
TDA11P38854 MDE1YJR024C 735 nt6.1□□□□□ -1.43
TDA11P38854 YLL056CYLL056C 897 nt6.1□□□□□ -1.43
TDA11P38854 LSC1YOR142W 990 nt6.1□□□□□ -1.43
TDA11P38854 STE13YOR219C 2796 nt6.09□□□□□ -1.43
TDA11P38854 EPS1YIL005W 2106 nt6.09□□□□□ -1.43
TDA11P38854 IMD1YAR073W 1212 nt6.09□□□□□ -1.43
TDA11P38854 YMR252CYMR252C 405 nt6.09□□□□□ -1.43
TDA11P38854 MRPS18YNL306W 654 nt6.09□□□□□ -1.43
TDA11P38854 ILV6YCL009C 930 nt6.09□□□□□ -1.43
TDA11P38854 YGR054WYGR054W 1929 nt6.09□□□□□ -1.44
TDA11P38854 YDL085C-AYDL085C-A 207 nt6.08□□□□□ -1.44
TDA11P38854 FAL1YDR021W 1200 nt6.08□□□□□ -1.44
TDA11P38854 TMT1YER175C 900 nt6.08□□□□□ -1.44
TDA11P38854 TAF9YMR236W 474 nt6.08□□□□□ -1.44
TDA11P38854 IMG1YCR046C 510 nt6.07□□□□□ -1.44
TDA11P38854 FYV1YDR024W 486 nt6.07□□□□□ -1.44
TDA11P38854 IDP3YNL009W 1263 nt6.07□□□□□ -1.44
TDA11P38854 YPL041CYPL041C 624 nt6.07□□□□□ -1.44
TDA11P38854 GPA1YHR005C 1419 nt6.07□□□□□ -1.44
TDA11P38854 GCG1YER163C 699 nt6.06□□□□□ -1.44
TDA11P38854 YGL235WYGL235W 537 nt6.06□□□□□ -1.44
TDA11P38854 MCH1YDL054C 1461 nt6.06□□□□□ -1.44
TDA11P38854 GSY2YLR258W 2118 nt6.05□□□□□ -1.44
TDA11P38854 SSK22YCR073C 3996 nt6.05□□□□□ -1.44
TDA11P38854 TEP1YNL128W 1305 nt6.05□□□□□ -1.44
TDA11P38854 YHR070C-AYHR070C-A 411 nt6.05□□□□□ -1.44
TDA11P38854 POP5YAL033W 522 nt6.05□□□□□ -1.44
TDA11P38854 HDA1YNL021W 2121 nt6.05□□□□□ -1.44
TDA11P38854 SCT1YBL011W 2280 nt6.04□□□□□ -1.44
TDA11P38854 XBP1YIL101C 1944 nt6.04□□□□□ -1.44
TDA11P38854 YKL223WYKL223W 333 nt6.04□□□□□ -1.44
TDA11P38854 YLR361C-AYLR361C-A 297 nt6.04□□□□□ -1.44
TDA11P38854 GUA1YMR217W 1578 nt6.03□□□□□ -1.44
TDA11P38854 CWC21YDR482C 408 nt6.03□□□□□ -1.44
TDA11P38854 YKL077WYKL077W 1179 nt6.03□□□□□ -1.44
TDA11P38854 SCO2YBR024W 906 nt6.03□□□□□ -1.44
TDA11P38854 IFA38YBR159W 1044 nt6.03□□□□□ -1.44
TDA11P38854 ERG8YMR220W 1356 nt6.03□□□□□ -1.44
Retrieved 100 of 7,029 protein–RNA pairs in 14.3 ms