Protein–RNA interactions for Protein: P22001

KCNA3, Potassium voltage-gated channel subfamily A member 3, humanhuman

Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNA3P22001 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC30.38■■■□□ 2.45
KCNA3P22001 AC022616.5-201ENST00000518796 181 ntBASIC30.37■■■□□ 2.45
KCNA3P22001 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC30.37■■■□□ 2.45
KCNA3P22001 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC30.37■■■□□ 2.45
KCNA3P22001 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC30.36■■■□□ 2.45
KCNA3P22001 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC30.36■■■□□ 2.45
KCNA3P22001 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC30.36■■■□□ 2.45
KCNA3P22001 AC021242.3-201ENST00000607598 1377 ntBASIC30.36■■■□□ 2.45
KCNA3P22001 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC30.36■■■□□ 2.45
KCNA3P22001 TSPY9P-201ENST00000440215 945 ntBASIC30.35■■■□□ 2.45
KCNA3P22001 TSPY11P-201ENST00000442607 1045 ntBASIC30.35■■■□□ 2.45
KCNA3P22001 AC110285.6-201ENST00000617652 491 ntBASIC30.35■■■□□ 2.45
KCNA3P22001 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC30.35■■■□□ 2.45
KCNA3P22001 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC30.34■■■□□ 2.45
KCNA3P22001 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC30.34■■■□□ 2.45
KCNA3P22001 RPP21-222ENST00000433076 577 ntTSL 2 BASIC30.34■■■□□ 2.45
KCNA3P22001 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC30.34■■■□□ 2.45
KCNA3P22001 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC30.33■■■□□ 2.45
KCNA3P22001 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC30.33■■■□□ 2.45
KCNA3P22001 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC30.33■■■□□ 2.45
KCNA3P22001 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC30.33■■■□□ 2.45
KCNA3P22001 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC30.33■■■□□ 2.45
KCNA3P22001 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC30.33■■■□□ 2.45
KCNA3P22001 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC30.33■■■□□ 2.45
KCNA3P22001 UBP1-201ENST00000283628 2074 ntAPPRIS P3 TSL 2 BASIC30.33■■■□□ 2.45
KCNA3P22001 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC30.33■■■□□ 2.45
KCNA3P22001 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC30.32■■■□□ 2.44
KCNA3P22001 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC30.32■■■□□ 2.44
KCNA3P22001 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC30.31■■■□□ 2.44
KCNA3P22001 AL139393.2-201ENST00000608721 2025 ntBASIC30.31■■■□□ 2.44
KCNA3P22001 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC30.31■■■□□ 2.44
KCNA3P22001 AC005837.3-201ENST00000612163 286 ntBASIC30.31■■■□□ 2.44
KCNA3P22001 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC30.31■■■□□ 2.44
KCNA3P22001 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC30.31■■■□□ 2.44
KCNA3P22001 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC30.31■■■□□ 2.44
KCNA3P22001 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC30.3■■■□□ 2.44
KCNA3P22001 WHAMMP3-201ENST00000611636 1609 ntBASIC30.3■■■□□ 2.44
KCNA3P22001 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC30.3■■■□□ 2.44
KCNA3P22001 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC30.3■■■□□ 2.44
KCNA3P22001 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC30.29■■■□□ 2.44
KCNA3P22001 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC30.29■■■□□ 2.44
KCNA3P22001 AL136116.3-201ENST00000402907 1138 ntBASIC30.29■■■□□ 2.44
KCNA3P22001 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC30.29■■■□□ 2.44
KCNA3P22001 SRR-208ENST00000576848 588 ntTSL 4 BASIC30.29■■■□□ 2.44
KCNA3P22001 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC30.28■■■□□ 2.44
KCNA3P22001 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC30.28■■■□□ 2.44
KCNA3P22001 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC30.27■■■□□ 2.44
KCNA3P22001 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC30.27■■■□□ 2.44
KCNA3P22001 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC30.27■■■□□ 2.44
KCNA3P22001 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC30.27■■■□□ 2.44
KCNA3P22001 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC30.26■■■□□ 2.43
KCNA3P22001 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC30.26■■■□□ 2.43
KCNA3P22001 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC30.26■■■□□ 2.43
KCNA3P22001 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC30.26■■■□□ 2.43
KCNA3P22001 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC30.25■■■□□ 2.43
KCNA3P22001 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC30.25■■■□□ 2.43
KCNA3P22001 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC30.25■■■□□ 2.43
KCNA3P22001 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC30.25■■■□□ 2.43
KCNA3P22001 AC092028.1-203ENST00000608262 953 ntBASIC30.25■■■□□ 2.43
KCNA3P22001 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC30.25■■■□□ 2.43
KCNA3P22001 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC30.24■■■□□ 2.43
KCNA3P22001 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC30.24■■■□□ 2.43
KCNA3P22001 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC30.24■■■□□ 2.43
KCNA3P22001 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC30.24■■■□□ 2.43
KCNA3P22001 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC30.24■■■□□ 2.43
KCNA3P22001 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC30.24■■■□□ 2.43
KCNA3P22001 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC30.24■■■□□ 2.43
KCNA3P22001 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC30.23■■■□□ 2.43
KCNA3P22001 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC30.23■■■□□ 2.43
KCNA3P22001 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC30.22■■■□□ 2.43
KCNA3P22001 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC30.22■■■□□ 2.43
KCNA3P22001 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC30.22■■■□□ 2.43
KCNA3P22001 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC30.22■■■□□ 2.43
KCNA3P22001 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC30.21■■■□□ 2.43
KCNA3P22001 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC30.21■■■□□ 2.43
KCNA3P22001 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC30.21■■■□□ 2.43
KCNA3P22001 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC30.21■■■□□ 2.43
KCNA3P22001 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC30.2■■■□□ 2.43
KCNA3P22001 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC30.2■■■□□ 2.43
KCNA3P22001 AC120024.1-201ENST00000562672 995 ntBASIC30.2■■■□□ 2.43
KCNA3P22001 AL117332.1-201ENST00000622628 974 ntBASIC30.2■■■□□ 2.43
KCNA3P22001 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC30.19■■■□□ 2.42
KCNA3P22001 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC30.19■■■□□ 2.42
KCNA3P22001 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC30.19■■■□□ 2.42
KCNA3P22001 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC30.19■■■□□ 2.42
KCNA3P22001 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC30.19■■■□□ 2.42
KCNA3P22001 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC30.19■■■□□ 2.42
KCNA3P22001 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC30.19■■■□□ 2.42
KCNA3P22001 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC30.19■■■□□ 2.42
KCNA3P22001 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC30.19■■■□□ 2.42
KCNA3P22001 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC30.18■■■□□ 2.42
KCNA3P22001 MIR3621-201ENST00000580529 85 ntBASIC30.18■■■□□ 2.42
KCNA3P22001 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC30.18■■■□□ 2.42
KCNA3P22001 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC30.17■■■□□ 2.42
KCNA3P22001 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC30.17■■■□□ 2.42
KCNA3P22001 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC30.17■■■□□ 2.42
KCNA3P22001 AC096631.2-201ENST00000436136 790 ntBASIC30.17■■■□□ 2.42
KCNA3P22001 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC30.17■■■□□ 2.42
KCNA3P22001 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC30.16■■■□□ 2.42
KCNA3P22001 AC092666.2-201ENST00000613287 246 ntBASIC30.16■■■□□ 2.42
Retrieved 100 of 98,524 protein–RNA pairs in 12.9 ms