Protein–RNA interactions for Protein: P14780

MMP9, Matrix metalloproteinase-9, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP9P14780 REST-210ENST00000638187 1334 ntTSL 5 BASIC20.29■□□□□ 0.84
MMP9P14780 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
MMP9P14780 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC20.29■□□□□ 0.84
MMP9P14780 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC20.29■□□□□ 0.84
MMP9P14780 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC20.29■□□□□ 0.84
MMP9P14780 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
MMP9P14780 WHAMMP3-201ENST00000611636 1609 ntBASIC20.28■□□□□ 0.84
MMP9P14780 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC20.28■□□□□ 0.84
MMP9P14780 AC025884.2-201ENST00000553429 711 ntBASIC20.28■□□□□ 0.84
MMP9P14780 AC007029.1-201ENST00000604183 313 ntBASIC20.28■□□□□ 0.84
MMP9P14780 SMPD5-203ENST00000639008 1464 ntBASIC20.28■□□□□ 0.84
MMP9P14780 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC20.28■□□□□ 0.84
MMP9P14780 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
MMP9P14780 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
MMP9P14780 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC20.27■□□□□ 0.84
MMP9P14780 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
MMP9P14780 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC20.27■□□□□ 0.84
MMP9P14780 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
MMP9P14780 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC20.27■□□□□ 0.84
MMP9P14780 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
MMP9P14780 U85056.1-201ENST00000616429 682 ntBASIC20.27■□□□□ 0.84
MMP9P14780 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC20.27■□□□□ 0.84
MMP9P14780 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
MMP9P14780 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC20.27■□□□□ 0.83
MMP9P14780 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC20.27■□□□□ 0.83
MMP9P14780 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC20.26■□□□□ 0.83
MMP9P14780 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC20.26■□□□□ 0.83
MMP9P14780 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
MMP9P14780 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC20.26■□□□□ 0.83
MMP9P14780 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
MMP9P14780 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
MMP9P14780 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC20.26■□□□□ 0.83
MMP9P14780 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
MMP9P14780 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC20.25■□□□□ 0.83
MMP9P14780 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC20.25■□□□□ 0.83
MMP9P14780 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
MMP9P14780 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC20.25■□□□□ 0.83
MMP9P14780 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
MMP9P14780 SNAI3-AS1-204ENST00000567997 2048 ntBASIC20.24■□□□□ 0.83
MMP9P14780 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
MMP9P14780 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
MMP9P14780 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
MMP9P14780 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
MMP9P14780 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
MMP9P14780 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
MMP9P14780 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC20.24■□□□□ 0.83
MMP9P14780 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC20.24■□□□□ 0.83
MMP9P14780 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
MMP9P14780 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC20.23■□□□□ 0.83
MMP9P14780 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
MMP9P14780 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC20.23■□□□□ 0.83
MMP9P14780 AC092803.2-201ENST00000564287 1899 ntBASIC20.23■□□□□ 0.83
MMP9P14780 AC093323.1-202ENST00000635031 2045 ntBASIC20.23■□□□□ 0.83
MMP9P14780 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
MMP9P14780 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
MMP9P14780 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC20.22■□□□□ 0.83
MMP9P14780 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
MMP9P14780 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
MMP9P14780 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC20.22■□□□□ 0.83
MMP9P14780 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC20.22■□□□□ 0.83
MMP9P14780 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
MMP9P14780 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
MMP9P14780 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
MMP9P14780 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC20.22■□□□□ 0.83
MMP9P14780 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
MMP9P14780 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
MMP9P14780 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC20.21■□□□□ 0.83
MMP9P14780 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
MMP9P14780 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
MMP9P14780 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC20.21■□□□□ 0.83
MMP9P14780 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
MMP9P14780 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
MMP9P14780 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
MMP9P14780 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
MMP9P14780 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC20.2■□□□□ 0.83
MMP9P14780 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.83
MMP9P14780 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
MMP9P14780 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
MMP9P14780 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
MMP9P14780 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
MMP9P14780 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC20.19■□□□□ 0.82
MMP9P14780 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
MMP9P14780 PFN2-211ENST00000489155 636 ntTSL 4 BASIC20.19■□□□□ 0.82
MMP9P14780 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC20.19■□□□□ 0.82
MMP9P14780 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
MMP9P14780 AL359504.2-201ENST00000605506 1601 ntBASIC20.19■□□□□ 0.82
MMP9P14780 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
MMP9P14780 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC20.18■□□□□ 0.82
MMP9P14780 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
MMP9P14780 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
MMP9P14780 GFER-205ENST00000569451 517 ntTSL 5 BASIC20.18■□□□□ 0.82
MMP9P14780 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
MMP9P14780 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC20.18■□□□□ 0.82
MMP9P14780 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
MMP9P14780 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
MMP9P14780 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC20.17■□□□□ 0.82
MMP9P14780 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
MMP9P14780 KRT18P60-201ENST00000312876 1297 ntBASIC20.17■□□□□ 0.82
MMP9P14780 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
MMP9P14780 RP9P-202ENST00000450133 1212 ntBASIC20.17■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 12.3 ms