Protein–RNA interactions for Protein: P0CI26

TRIM49C, Tripartite motif-containing protein 49C, humanhuman

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49CP0CI26 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
TRIM49CP0CI26 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
TRIM49CP0CI26 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
TRIM49CP0CI26 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
TRIM49CP0CI26 REST-210ENST00000638187 1334 ntTSL 5 BASIC26.33■■□□□ 1.81
TRIM49CP0CI26 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC26.33■■□□□ 1.8
TRIM49CP0CI26 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC26.33■■□□□ 1.8
TRIM49CP0CI26 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC26.33■■□□□ 1.8
TRIM49CP0CI26 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC26.32■■□□□ 1.8
TRIM49CP0CI26 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC26.32■■□□□ 1.8
TRIM49CP0CI26 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC26.32■■□□□ 1.8
TRIM49CP0CI26 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
TRIM49CP0CI26 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC26.32■■□□□ 1.8
TRIM49CP0CI26 MIR3960-201ENST00000583311 91 ntBASIC26.32■■□□□ 1.8
TRIM49CP0CI26 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC26.32■■□□□ 1.8
TRIM49CP0CI26 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
TRIM49CP0CI26 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
TRIM49CP0CI26 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC26.32■■□□□ 1.8
TRIM49CP0CI26 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC26.31■■□□□ 1.8
TRIM49CP0CI26 AC010501.1-201ENST00000606270 1962 ntBASIC26.31■■□□□ 1.8
TRIM49CP0CI26 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
TRIM49CP0CI26 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC26.31■■□□□ 1.8
TRIM49CP0CI26 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC26.31■■□□□ 1.8
TRIM49CP0CI26 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC26.31■■□□□ 1.8
TRIM49CP0CI26 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
TRIM49CP0CI26 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC26.3■■□□□ 1.8
TRIM49CP0CI26 HES4-202ENST00000428771 1040 ntTSL 2 BASIC26.3■■□□□ 1.8
TRIM49CP0CI26 AC007029.1-201ENST00000604183 313 ntBASIC26.3■■□□□ 1.8
TRIM49CP0CI26 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
TRIM49CP0CI26 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
TRIM49CP0CI26 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC26.3■■□□□ 1.8
TRIM49CP0CI26 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
TRIM49CP0CI26 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC26.3■■□□□ 1.8
TRIM49CP0CI26 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC26.29■■□□□ 1.8
TRIM49CP0CI26 HSD17B1P1-201ENST00000590052 955 ntBASIC26.29■■□□□ 1.8
TRIM49CP0CI26 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
TRIM49CP0CI26 RNF126P1-201ENST00000567452 1320 ntBASIC26.28■■□□□ 1.8
TRIM49CP0CI26 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC26.28■■□□□ 1.8
TRIM49CP0CI26 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
TRIM49CP0CI26 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC26.27■■□□□ 1.8
TRIM49CP0CI26 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
TRIM49CP0CI26 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC26.27■■□□□ 1.8
TRIM49CP0CI26 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
TRIM49CP0CI26 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
TRIM49CP0CI26 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
TRIM49CP0CI26 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
TRIM49CP0CI26 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
TRIM49CP0CI26 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
TRIM49CP0CI26 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
TRIM49CP0CI26 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC26.26■■□□□ 1.79
TRIM49CP0CI26 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
TRIM49CP0CI26 RP9P-202ENST00000450133 1212 ntBASIC26.26■■□□□ 1.79
TRIM49CP0CI26 AC093536.1-201ENST00000569153 554 ntBASIC26.26■■□□□ 1.79
TRIM49CP0CI26 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
TRIM49CP0CI26 AC096887.2-201ENST00000623443 1957 ntBASIC26.26■■□□□ 1.79
TRIM49CP0CI26 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC26.25■■□□□ 1.79
TRIM49CP0CI26 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
TRIM49CP0CI26 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC26.25■■□□□ 1.79
TRIM49CP0CI26 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
TRIM49CP0CI26 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC26.24■■□□□ 1.79
TRIM49CP0CI26 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
TRIM49CP0CI26 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC26.24■■□□□ 1.79
TRIM49CP0CI26 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC26.24■■□□□ 1.79
TRIM49CP0CI26 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
TRIM49CP0CI26 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC26.24■■□□□ 1.79
TRIM49CP0CI26 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC26.23■■□□□ 1.79
TRIM49CP0CI26 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
TRIM49CP0CI26 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
TRIM49CP0CI26 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
TRIM49CP0CI26 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC26.23■■□□□ 1.79
TRIM49CP0CI26 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC26.22■■□□□ 1.79
TRIM49CP0CI26 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC26.22■■□□□ 1.79
TRIM49CP0CI26 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC26.22■■□□□ 1.79
TRIM49CP0CI26 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC26.22■■□□□ 1.79
TRIM49CP0CI26 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC26.21■■□□□ 1.79
TRIM49CP0CI26 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
TRIM49CP0CI26 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
TRIM49CP0CI26 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC26.21■■□□□ 1.79
TRIM49CP0CI26 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC26.21■■□□□ 1.79
TRIM49CP0CI26 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC26.2■■□□□ 1.79
TRIM49CP0CI26 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.79
TRIM49CP0CI26 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC26.2■■□□□ 1.79
TRIM49CP0CI26 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC26.2■■□□□ 1.79
TRIM49CP0CI26 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC26.2■■□□□ 1.78
TRIM49CP0CI26 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC26.2■■□□□ 1.78
TRIM49CP0CI26 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC26.2■■□□□ 1.78
TRIM49CP0CI26 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC26.2■■□□□ 1.78
TRIM49CP0CI26 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
TRIM49CP0CI26 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC26.19■■□□□ 1.78
TRIM49CP0CI26 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
TRIM49CP0CI26 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
TRIM49CP0CI26 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC26.19■■□□□ 1.78
TRIM49CP0CI26 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
TRIM49CP0CI26 RARRES2P2-201ENST00000394842 485 ntBASIC26.18■■□□□ 1.78
TRIM49CP0CI26 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
TRIM49CP0CI26 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
TRIM49CP0CI26 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC26.18■■□□□ 1.78
TRIM49CP0CI26 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC26.18■■□□□ 1.78
TRIM49CP0CI26 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
TRIM49CP0CI26 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
Retrieved 100 of 98,524 protein–RNA pairs in 11.7 ms