Protein–RNA interactions for Protein: O96018

APBA3, Amyloid-beta A4 precursor protein-binding family A member 3, humanhuman

Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APBA3O96018 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC31.83■■■□□ 2.69
APBA3O96018 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC31.83■■■□□ 2.69
APBA3O96018 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC31.83■■■□□ 2.69
APBA3O96018 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC31.83■■■□□ 2.69
APBA3O96018 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC31.82■■■□□ 2.69
APBA3O96018 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC31.82■■■□□ 2.68
APBA3O96018 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC31.82■■■□□ 2.68
APBA3O96018 AC104564.3-201ENST00000582367 638 ntBASIC31.82■■■□□ 2.68
APBA3O96018 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC31.82■■■□□ 2.68
APBA3O96018 GRASP-201ENST00000293662 1933 ntAPPRIS P1 TSL 1 (best) BASIC31.82■■■□□ 2.68
APBA3O96018 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC31.81■■■□□ 2.68
APBA3O96018 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC31.81■■■□□ 2.68
APBA3O96018 AC026271.2-201ENST00000428091 497 ntBASIC31.81■■■□□ 2.68
APBA3O96018 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC31.81■■■□□ 2.68
APBA3O96018 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC31.8■■■□□ 2.68
APBA3O96018 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC31.8■■■□□ 2.68
APBA3O96018 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC31.8■■■□□ 2.68
APBA3O96018 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC31.8■■■□□ 2.68
APBA3O96018 MIR3621-201ENST00000580529 85 ntBASIC31.79■■■□□ 2.68
APBA3O96018 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC31.78■■■□□ 2.68
APBA3O96018 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC31.78■■■□□ 2.68
APBA3O96018 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC31.77■■■□□ 2.68
APBA3O96018 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC31.77■■■□□ 2.68
APBA3O96018 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC31.77■■■□□ 2.68
APBA3O96018 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC31.77■■■□□ 2.68
APBA3O96018 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC31.77■■■□□ 2.68
APBA3O96018 EMID1-201ENST00000334018 2173 ntAPPRIS P1 TSL 1 (best) BASIC31.77■■■□□ 2.68
APBA3O96018 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC31.76■■■□□ 2.67
APBA3O96018 MIR4466-201ENST00000606121 54 ntBASIC31.76■■■□□ 2.67
APBA3O96018 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC31.76■■■□□ 2.67
APBA3O96018 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC31.76■■■□□ 2.67
APBA3O96018 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC31.75■■■□□ 2.67
APBA3O96018 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC31.74■■■□□ 2.67
APBA3O96018 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC31.74■■■□□ 2.67
APBA3O96018 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC31.74■■■□□ 2.67
APBA3O96018 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC31.74■■■□□ 2.67
APBA3O96018 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC31.74■■■□□ 2.67
APBA3O96018 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC31.74■■■□□ 2.67
APBA3O96018 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC31.74■■■□□ 2.67
APBA3O96018 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC31.73■■■□□ 2.67
APBA3O96018 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC31.73■■■□□ 2.67
APBA3O96018 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC31.73■■■□□ 2.67
APBA3O96018 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC31.73■■■□□ 2.67
APBA3O96018 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC31.73■■■□□ 2.67
APBA3O96018 LMNTD2-201ENST00000329451 2084 ntAPPRIS P1 TSL 1 (best) BASIC31.72■■■□□ 2.67
APBA3O96018 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC31.72■■■□□ 2.67
APBA3O96018 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC31.71■■■□□ 2.67
APBA3O96018 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC31.71■■■□□ 2.67
APBA3O96018 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC31.71■■■□□ 2.67
APBA3O96018 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC31.71■■■□□ 2.67
APBA3O96018 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC31.7■■■□□ 2.67
APBA3O96018 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC31.7■■■□□ 2.67
APBA3O96018 AC010997.5-201ENST00000609182 354 ntBASIC31.7■■■□□ 2.67
APBA3O96018 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC31.7■■■□□ 2.67
APBA3O96018 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC31.69■■■□□ 2.66
APBA3O96018 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC31.69■■■□□ 2.66
APBA3O96018 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC31.69■■■□□ 2.66
APBA3O96018 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC31.69■■■□□ 2.66
APBA3O96018 AC120024.1-201ENST00000562672 995 ntBASIC31.69■■■□□ 2.66
APBA3O96018 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC31.68■■■□□ 2.66
APBA3O96018 AL356740.2-201ENST00000601559 647 ntBASIC31.68■■■□□ 2.66
APBA3O96018 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC31.68■■■□□ 2.66
APBA3O96018 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC31.67■■■□□ 2.66
APBA3O96018 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC31.67■■■□□ 2.66
APBA3O96018 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC31.67■■■□□ 2.66
APBA3O96018 MIR5787-201ENST00000611784 55 ntBASIC31.67■■■□□ 2.66
APBA3O96018 MIR6724-1-201ENST00000616420 92 ntBASIC31.67■■■□□ 2.66
APBA3O96018 MIR6724-2-201ENST00000616483 92 ntBASIC31.67■■■□□ 2.66
APBA3O96018 MIR6724-4-201ENST00000617390 92 ntBASIC31.67■■■□□ 2.66
APBA3O96018 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC31.67■■■□□ 2.66
APBA3O96018 MIR6724-3-201ENST00000622482 92 ntBASIC31.67■■■□□ 2.66
APBA3O96018 AC135279.3-201ENST00000610945 1311 ntBASIC31.67■■■□□ 2.66
APBA3O96018 WHAMMP3-201ENST00000611636 1609 ntBASIC31.67■■■□□ 2.66
APBA3O96018 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC31.67■■■□□ 2.66
APBA3O96018 C11orf63-202ENST00000307257 1964 ntTSL 2 BASIC31.67■■■□□ 2.66
APBA3O96018 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC31.66■■■□□ 2.66
APBA3O96018 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC31.66■■■□□ 2.66
APBA3O96018 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC31.65■■■□□ 2.66
APBA3O96018 SULT4A1-201ENST00000330884 2468 ntAPPRIS P1 TSL 1 (best) BASIC31.65■■■□□ 2.66
APBA3O96018 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC31.64■■■□□ 2.66
APBA3O96018 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC31.64■■■□□ 2.66
APBA3O96018 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC31.64■■■□□ 2.66
APBA3O96018 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC31.64■■■□□ 2.65
APBA3O96018 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC31.63■■■□□ 2.65
APBA3O96018 AC142381.2-201ENST00000566120 298 ntBASIC31.63■■■□□ 2.65
APBA3O96018 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC31.63■■■□□ 2.65
APBA3O96018 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC31.63■■■□□ 2.65
APBA3O96018 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC31.63■■■□□ 2.65
APBA3O96018 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC31.62■■■□□ 2.65
APBA3O96018 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC31.62■■■□□ 2.65
APBA3O96018 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC31.62■■■□□ 2.65
APBA3O96018 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC31.62■■■□□ 2.65
APBA3O96018 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC31.61■■■□□ 2.65
APBA3O96018 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC31.61■■■□□ 2.65
APBA3O96018 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC31.61■■■□□ 2.65
APBA3O96018 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC31.61■■■□□ 2.65
APBA3O96018 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC31.6■■■□□ 2.65
APBA3O96018 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC31.59■■■□□ 2.65
APBA3O96018 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC31.59■■■□□ 2.65
APBA3O96018 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC31.59■■■□□ 2.65
Retrieved 100 of 98,524 protein–RNA pairs in 15 ms